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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035498.1-P Field mustard cytosol 20.91 84.69
CDY17092 Canola cytosol 22.42 83.96
CDY54697 Canola mitochondrion 27.2 72.97
CDY16010 Canola cytosol, nucleus, plastid 93.45 67.33
CDY26570 Canola cytosol 72.8 64.22
GSMUA_Achr4P17980_001 Banana cytosol 16.12 59.81
Bra026966.1-P Field mustard cytosol 34.26 56.9
PGSC0003DMT400058518 Potato cytosol 19.4 55.4
AT1G12550.1 Thale cress cytosol 44.33 54.49
Bra019774.1-P Field mustard cytosol 45.84 52.75
HORVU4Hr1G086940.2 Barley cytosol 15.62 48.06
HORVU2Hr1G005210.2 Barley mitochondrion 31.99 45.85
KRH65202 Soybean cytosol 25.44 44.89
VIT_02s0025g04750.t01 Wine grape cytosol, plasma membrane 32.75 44.83
TraesCS2D01G034000.1 Wheat cytosol, peroxisome, plastid 35.77 44.51
GSMUA_Achr5P14420_001 Banana cytosol 36.52 43.94
TraesCS2A01G034800.1 Wheat cytosol, plasma membrane, plastid 34.76 43.67
Os04t0107500-01 Rice plasma membrane 34.51 43.35
TraesCS2B01G047900.1 Wheat cytosol, peroxisome, plastid 34.51 43.35
Zm00001d018790_P001 Maize extracellular, plasma membrane 34.01 43.13
TraesCS2D01G030900.1 Wheat cytosol 34.26 43.04
PGSC0003DMT400058520 Potato cytosol 35.01 42.77
OQU81061 Sorghum plastid 34.26 42.63
VIT_02s0025g04730.t01 Wine grape cytosol 34.01 42.59
Bra003537.1-P Field mustard cytosol 33.5 42.49
KRH65201 Soybean plastid 30.48 42.16
OQU88433 Sorghum cytosol 34.01 42.06
KRH48312 Soybean cytosol 35.01 41.25
TraesCS2A01G028600.1 Wheat extracellular, plasma membrane 34.76 41.19
GSMUA_Achr5P14430_001 Banana mitochondrion 31.49 41.12
TraesCS2A01G035500.1 Wheat extracellular, mitochondrion 34.51 41.02
Os04t0107200-01 Rice mitochondrion 33.75 40.73
Bra035206.1-P Field mustard cytosol 31.49 40.32
TraesCS2A01G035400.1 Wheat mitochondrion 33.5 40.3
TraesCS2D01G034600.1 Wheat mitochondrion 33.5 40.3
TraesCS2D01G034700.1 Wheat mitochondrion, plastid 33.75 40.12
HORVU2Hr1G005140.13 Barley endoplasmic reticulum, extracellular, mitochondrion 35.77 39.78
EES11740 Sorghum mitochondrion 33.0 39.7
KRH48310 Soybean cytosol 33.25 39.52
TraesCS2B01G048000.1 Wheat mitochondrion 32.24 39.51
Zm00001d008883_P001 Maize mitochondrion 32.75 39.39
KRH48313 Soybean cytosol 33.25 39.29
KRH48311 Soybean cytosol 33.0 39.22
TraesCS2D01G034100.1 Wheat mitochondrion 31.74 38.89
TraesCS2B01G048500.1 Wheat cytosol 33.0 38.87
TraesCS7A01G538500.1 Wheat cytosol 33.5 38.66
Os04t0106400-01 Rice cytosol, mitochondrion, plastid 31.99 38.6
TraesCS2A01G034900.1 Wheat mitochondrion 31.49 38.58
TraesCS7B01G456600.1 Wheat cytosol, plastid 33.25 38.37
TraesCS2B01G048100.1 Wheat plastid 33.25 38.37
Zm00001d024906_P001 Maize cytosol 31.49 37.99
HORVU2Hr1G005230.1 Barley cytosol, mitochondrion 32.75 37.9
TraesCSU01G226500.1 Wheat extracellular, golgi, mitochondrion 30.48 37.46
TraesCS1B01G004500.1 Wheat extracellular, golgi, mitochondrion 30.48 37.46
Zm00001d024907_P001 Maize mitochondrion 31.74 37.39
OQU81058 Sorghum cytosol 31.49 37.31
Os04t0107300-01 Rice mitochondrion, plasma membrane 30.48 37.12
EES11738 Sorghum cytosol 31.49 36.98
EES10400 Sorghum cytosol 31.23 36.69
Zm00001d004451_P001 Maize cytosol 30.48 35.91
TraesCS2D01G034300.1 Wheat plastid 32.49 35.64
TraesCS2A01G035000.2 Wheat mitochondrion, plastid 32.49 35.64
EES10352 Sorghum cytosol, mitochondrion 29.97 35.21
Os11t0229100-01 Rice extracellular 11.08 31.65
VIT_15s0048g01330.t01 Wine grape mitochondrion, peroxisome, plastid 35.01 30.15
HORVU2Hr1G005150.2 Barley plastid 25.94 28.85
Bra004055.1-P Field mustard cytosol 18.39 18.91
Bra004275.1-P Field mustard cytosol 18.39 18.91
Bra023487.1-P Field mustard mitochondrion 15.87 16.41
Bra003888.1-P Field mustard mitochondrion 15.37 16.4
Bra008737.1-P Field mustard mitochondrion 15.37 15.89
Bra017637.1-P Field mustard plastid 18.39 12.21
Bra034616.1-P Field mustard plastid 18.39 12.15
Bra016589.1-P Field mustard plastid 18.89 12.08
Bra011506.1-P Field mustard plastid 17.88 11.43
Bra001747.1-P Field mustard plastid 16.88 11.41
Bra034615.1-P Field mustard cytosol 1.01 2.34
Protein Annotations
MapMan:15.5.32Gene3D:3.40.50.720Gene3D:4.10.280.10EnsemblPlantsGene:Bra026967EnsemblPlants:Bra026967.1EnsemblPlants:Bra026967.1-P
ncoils:CoilInterPro:D-isomer_2_OHA_DH_cat_domInterPro:D-isomer_DH_NAD-bdGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016616
GO:GO:0046983GO:GO:0051287GO:GO:0055114InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638
UniProt:M4EDV7InterPro:NAD(P)-bd_dom_sfPFAM:PF00010PFAM:PF00389PFAM:PF02826PFscan:PS50888
PANTHER:PTHR10996PANTHER:PTHR10996:SF179SUPFAM:SSF47459SUPFAM:SSF51735UniParc:UPI000254288AInterPro:bHLH_dom
SEG:seg:::::
Description
AT1G12550 (E=3e-059) | oxidoreductase family protein
Coordinates
chrA09:-:34520062..34523398
Molecular Weight (calculated)
43603.2 Da
IEP (calculated)
6.705
GRAVY (calculated)
-0.229
Length
397 amino acids
Sequence
(BLAST)
001: MDFASSSADF AYENELDLSS LMTPSTFIPF QEPNPSIPTI HCAGAENDGR QRIRETTTTD EIITNEDVEP KNKKAKRREI ERHRRQEVTS LFGNLRYILP
101: SQYIKGKRSS SDHVQEAVNY IKDLEKKIKE ISLKRDRIKR SLSHSSSTGE CSIRSLESSY CSCDGDTHIN VKLIVCTSVG TDHVDLPECN RRGIAVTNAG
201: GAYSEDVADY AVGLLISFLR RIPAADRYVR SGKWVRCGEF QLGIKLSGKR VGILGLGSIG SLIPYQYYPD VVSLAANSDV IILCCALNDQ TRHIVNREVM
301: EALGKKGVII NVGRGGLIDE KEMVKCLVDG VIGGAGLDVF EKEPGVPEEL FGLDNVVLSP HAAMATPGSL NNIAQLTLAN LKAFFSNQPL ISPVRLD
Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)
001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD
Arabidopsis Description
HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.