Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra035498.1-P | Field mustard | cytosol | 20.91 | 84.69 |
CDY17092 | Canola | cytosol | 22.42 | 83.96 |
CDY54697 | Canola | mitochondrion | 27.2 | 72.97 |
CDY16010 | Canola | cytosol, nucleus, plastid | 93.45 | 67.33 |
CDY26570 | Canola | cytosol | 72.8 | 64.22 |
GSMUA_Achr4P17980_001 | Banana | cytosol | 16.12 | 59.81 |
Bra026966.1-P | Field mustard | cytosol | 34.26 | 56.9 |
PGSC0003DMT400058518 | Potato | cytosol | 19.4 | 55.4 |
AT1G12550.1 | Thale cress | cytosol | 44.33 | 54.49 |
Bra019774.1-P | Field mustard | cytosol | 45.84 | 52.75 |
HORVU4Hr1G086940.2 | Barley | cytosol | 15.62 | 48.06 |
HORVU2Hr1G005210.2 | Barley | mitochondrion | 31.99 | 45.85 |
KRH65202 | Soybean | cytosol | 25.44 | 44.89 |
VIT_02s0025g04750.t01 | Wine grape | cytosol, plasma membrane | 32.75 | 44.83 |
TraesCS2D01G034000.1 | Wheat | cytosol, peroxisome, plastid | 35.77 | 44.51 |
GSMUA_Achr5P14420_001 | Banana | cytosol | 36.52 | 43.94 |
TraesCS2A01G034800.1 | Wheat | cytosol, plasma membrane, plastid | 34.76 | 43.67 |
Os04t0107500-01 | Rice | plasma membrane | 34.51 | 43.35 |
TraesCS2B01G047900.1 | Wheat | cytosol, peroxisome, plastid | 34.51 | 43.35 |
Zm00001d018790_P001 | Maize | extracellular, plasma membrane | 34.01 | 43.13 |
TraesCS2D01G030900.1 | Wheat | cytosol | 34.26 | 43.04 |
PGSC0003DMT400058520 | Potato | cytosol | 35.01 | 42.77 |
OQU81061 | Sorghum | plastid | 34.26 | 42.63 |
VIT_02s0025g04730.t01 | Wine grape | cytosol | 34.01 | 42.59 |
Bra003537.1-P | Field mustard | cytosol | 33.5 | 42.49 |
KRH65201 | Soybean | plastid | 30.48 | 42.16 |
OQU88433 | Sorghum | cytosol | 34.01 | 42.06 |
KRH48312 | Soybean | cytosol | 35.01 | 41.25 |
TraesCS2A01G028600.1 | Wheat | extracellular, plasma membrane | 34.76 | 41.19 |
GSMUA_Achr5P14430_001 | Banana | mitochondrion | 31.49 | 41.12 |
TraesCS2A01G035500.1 | Wheat | extracellular, mitochondrion | 34.51 | 41.02 |
Os04t0107200-01 | Rice | mitochondrion | 33.75 | 40.73 |
Bra035206.1-P | Field mustard | cytosol | 31.49 | 40.32 |
TraesCS2A01G035400.1 | Wheat | mitochondrion | 33.5 | 40.3 |
TraesCS2D01G034600.1 | Wheat | mitochondrion | 33.5 | 40.3 |
TraesCS2D01G034700.1 | Wheat | mitochondrion, plastid | 33.75 | 40.12 |
HORVU2Hr1G005140.13 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 35.77 | 39.78 |
EES11740 | Sorghum | mitochondrion | 33.0 | 39.7 |
KRH48310 | Soybean | cytosol | 33.25 | 39.52 |
TraesCS2B01G048000.1 | Wheat | mitochondrion | 32.24 | 39.51 |
Zm00001d008883_P001 | Maize | mitochondrion | 32.75 | 39.39 |
KRH48313 | Soybean | cytosol | 33.25 | 39.29 |
KRH48311 | Soybean | cytosol | 33.0 | 39.22 |
TraesCS2D01G034100.1 | Wheat | mitochondrion | 31.74 | 38.89 |
TraesCS2B01G048500.1 | Wheat | cytosol | 33.0 | 38.87 |
TraesCS7A01G538500.1 | Wheat | cytosol | 33.5 | 38.66 |
Os04t0106400-01 | Rice | cytosol, mitochondrion, plastid | 31.99 | 38.6 |
TraesCS2A01G034900.1 | Wheat | mitochondrion | 31.49 | 38.58 |
TraesCS7B01G456600.1 | Wheat | cytosol, plastid | 33.25 | 38.37 |
TraesCS2B01G048100.1 | Wheat | plastid | 33.25 | 38.37 |
Zm00001d024906_P001 | Maize | cytosol | 31.49 | 37.99 |
HORVU2Hr1G005230.1 | Barley | cytosol, mitochondrion | 32.75 | 37.9 |
TraesCSU01G226500.1 | Wheat | extracellular, golgi, mitochondrion | 30.48 | 37.46 |
TraesCS1B01G004500.1 | Wheat | extracellular, golgi, mitochondrion | 30.48 | 37.46 |
Zm00001d024907_P001 | Maize | mitochondrion | 31.74 | 37.39 |
OQU81058 | Sorghum | cytosol | 31.49 | 37.31 |
Os04t0107300-01 | Rice | mitochondrion, plasma membrane | 30.48 | 37.12 |
EES11738 | Sorghum | cytosol | 31.49 | 36.98 |
EES10400 | Sorghum | cytosol | 31.23 | 36.69 |
Zm00001d004451_P001 | Maize | cytosol | 30.48 | 35.91 |
TraesCS2D01G034300.1 | Wheat | plastid | 32.49 | 35.64 |
TraesCS2A01G035000.2 | Wheat | mitochondrion, plastid | 32.49 | 35.64 |
EES10352 | Sorghum | cytosol, mitochondrion | 29.97 | 35.21 |
Os11t0229100-01 | Rice | extracellular | 11.08 | 31.65 |
VIT_15s0048g01330.t01 | Wine grape | mitochondrion, peroxisome, plastid | 35.01 | 30.15 |
HORVU2Hr1G005150.2 | Barley | plastid | 25.94 | 28.85 |
Bra004055.1-P | Field mustard | cytosol | 18.39 | 18.91 |
Bra004275.1-P | Field mustard | cytosol | 18.39 | 18.91 |
Bra023487.1-P | Field mustard | mitochondrion | 15.87 | 16.41 |
Bra003888.1-P | Field mustard | mitochondrion | 15.37 | 16.4 |
Bra008737.1-P | Field mustard | mitochondrion | 15.37 | 15.89 |
Bra017637.1-P | Field mustard | plastid | 18.39 | 12.21 |
Bra034616.1-P | Field mustard | plastid | 18.39 | 12.15 |
Bra016589.1-P | Field mustard | plastid | 18.89 | 12.08 |
Bra011506.1-P | Field mustard | plastid | 17.88 | 11.43 |
Bra001747.1-P | Field mustard | plastid | 16.88 | 11.41 |
Bra034615.1-P | Field mustard | cytosol | 1.01 | 2.34 |
Protein Annotations
MapMan:15.5.32 | Gene3D:3.40.50.720 | Gene3D:4.10.280.10 | EnsemblPlantsGene:Bra026967 | EnsemblPlants:Bra026967.1 | EnsemblPlants:Bra026967.1-P |
ncoils:Coil | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016616 |
GO:GO:0046983 | GO:GO:0051287 | GO:GO:0055114 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
UniProt:M4EDV7 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00010 | PFAM:PF00389 | PFAM:PF02826 | PFscan:PS50888 |
PANTHER:PTHR10996 | PANTHER:PTHR10996:SF179 | SUPFAM:SSF47459 | SUPFAM:SSF51735 | UniParc:UPI000254288A | InterPro:bHLH_dom |
SEG:seg | : | : | : | : | : |
Description
AT1G12550 (E=3e-059) | oxidoreductase family protein
Coordinates
chrA09:-:34520062..34523398
Molecular Weight (calculated)
43603.2 Da
IEP (calculated)
6.705
GRAVY (calculated)
-0.229
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFASSSADF AYENELDLSS LMTPSTFIPF QEPNPSIPTI HCAGAENDGR QRIRETTTTD EIITNEDVEP KNKKAKRREI ERHRRQEVTS LFGNLRYILP
101: SQYIKGKRSS SDHVQEAVNY IKDLEKKIKE ISLKRDRIKR SLSHSSSTGE CSIRSLESSY CSCDGDTHIN VKLIVCTSVG TDHVDLPECN RRGIAVTNAG
201: GAYSEDVADY AVGLLISFLR RIPAADRYVR SGKWVRCGEF QLGIKLSGKR VGILGLGSIG SLIPYQYYPD VVSLAANSDV IILCCALNDQ TRHIVNREVM
301: EALGKKGVII NVGRGGLIDE KEMVKCLVDG VIGGAGLDVF EKEPGVPEEL FGLDNVVLSP HAAMATPGSL NNIAQLTLAN LKAFFSNQPL ISPVRLD
101: SQYIKGKRSS SDHVQEAVNY IKDLEKKIKE ISLKRDRIKR SLSHSSSTGE CSIRSLESSY CSCDGDTHIN VKLIVCTSVG TDHVDLPECN RRGIAVTNAG
201: GAYSEDVADY AVGLLISFLR RIPAADRYVR SGKWVRCGEF QLGIKLSGKR VGILGLGSIG SLIPYQYYPD VVSLAANSDV IILCCALNDQ TRHIVNREVM
301: EALGKKGVII NVGRGGLIDE KEMVKCLVDG VIGGAGLDVF EKEPGVPEEL FGLDNVVLSP HAAMATPGSL NNIAQLTLAN LKAFFSNQPL ISPVRLD
001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD
Arabidopsis Description
HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.