Factsheet for TraesCS2A01G035500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

extracellular 2
mitochondrion 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	94.91	94.91
HORVU2Hr1G005210.2	Barley	mitochondrion	74.85	90.25
TraesCS2A01G035400.1	Wheat	mitochondrion	86.23	87.27
Zm00001d024906_P001	Maize	cytosol	74.25	75.38
EES11738	Sorghum	cytosol	74.55	73.67
EES10400	Sorghum	cytosol	73.95	73.08
EES10352	Sorghum	cytosol, mitochondrion	73.95	73.08
Zm00001d004451_P001	Maize	cytosol	73.05	72.4
TraesCS7A01G538500.1	Wheat	cytosol	74.55	72.38
GSMUA_Achr4P17980_001	Banana	cytosol	20.96	65.42
TraesCS2A01G034900.1	Wheat	mitochondrion	62.57	64.51
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	67.07	61.88
GSMUA_Achr5P14420_001	Banana	cytosol	59.28	60.0
GSMUA_Achr5P14430_001	Banana	mitochondrion	53.59	58.88
Solyc08g080030.2.1	Tomato	cytosol	45.51	56.3
PGSC0003DMT400058518	Potato	cytosol	23.05	55.4
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	47.01	54.14
Bra026966.1-P	Field mustard	cytosol	38.32	53.56
CDY54697	Canola	mitochondrion	23.65	53.38
CDY26572	Canola	cytosol	38.32	53.11
PGSC0003DMT400058520	Potato	cytosol	51.2	52.62
CDY57070	Canola	cytosol	50.3	52.17
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	49.1	51.9
CDY17092	Canola	cytosol	16.47	51.89
Bra035498.1-P	Field mustard	cytosol	14.97	51.02
AT2G45630.2	Thale cress	plastid	51.5	50.89
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	50.9	50.75
TraesCS3A01G153500.1	Wheat	peroxisome	47.6	50.0
CDY16011	Canola	cytosol, peroxisome, plastid	44.31	50.0
Bra019774.1-P	Field mustard	cytosol	51.5	49.86
CDX98054	Canola	cytosol	51.5	49.86
VIT_02s0025g04730.t01	Wine grape	cytosol	47.31	49.84
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	46.41	49.05
KRH48312	Soybean	cytosol	48.5	48.07
CDY26571	Canola	plastid	41.92	47.3
Solyc01g093990.2.1	Tomato	cytosol	45.21	46.75
CDY16012	Canola	cytosol, nucleus, peroxisome	32.93	45.64
KRH48313	Soybean	cytosol	45.81	45.54
KRH48311	Soybean	cytosol	45.21	45.21
KRH48310	Soybean	cytosol	43.11	43.11
KRH65202	Soybean	cytosol	28.14	41.78
KRH65201	Soybean	plastid	34.73	40.42
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	55.39	40.13
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	41.02	34.51
CDY16010	Canola	cytosol, nucleus, plastid	51.2	31.03
CDY26570	Canola	cytosol	37.43	27.78
TraesCS6A01G000400.1	Wheat	peroxisome	24.85	21.5
TraesCS5A01G161300.1	Wheat	plastid	23.65	20.9
TraesCS7A01G232200.1	Wheat	golgi	22.75	20.16
TraesCS6A01G274900.1	Wheat	mitochondrion	18.56	16.45
TraesCS7A01G496500.1	Wheat	plastid	27.84	15.2
TraesCS2A01G508900.1	Wheat	plastid	26.65	14.45
TraesCS3A01G146800.1	Wheat	plastid	26.65	14.35
TraesCS1A01G221000.1	Wheat	plastid	22.75	13.04

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2A01G035500	EnsemblPlants:TraesCS2A01G035500.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2A:-:15407848..15410019

Molecular Weight (calculated)

35350.3 Da

IEP (calculated)

6.604

GRAVY (calculated)

0.167

Length

334 amino acids

Sequence
(BLAST)

001: MASAGGSLLV LPAVLHLRRS DADFTAALRE RFRVLDFFAS GQPLPAFLAA AAAAPEPPRA AVVVGGGSVR VDASFLDAVP SLRCVVSTGA GVDHIDLDEC
101: ARRGVAVANS GEVYSTDVAD YAVGLLLDVL RRVSAAERYV RRGSWPAQGD YPLGSKLGGK RVGIIGLGNI GSRIAKRLEA FGCIIHYNSR KPKDSISYKY
201: FGNVHDLAAE SDVLIVACAL NKATRHIVNK DVLEALGKGG VVINIGRGAN IDEAELVIAL REGKIAGAGF DVFEHEPKVP AELFSMDNVV LSHHVAVFTE
301: ESRSDLRAHT VGNLEAFFSG QPLLTPVDAD SLVQ

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.