Factsheet for TraesCS7A01G496500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G400800.1	Wheat	plastid	96.08	96.24
TraesCS7D01G483800.1	Wheat	plastid	95.42	95.74
HORVU7Hr1G111190.2	Barley	mitochondrion	82.19	95.27
Zm00001d046923_P001	Maize	plastid	80.23	83.36
EER90146	Sorghum	mitochondrion, plastid	83.33	83.2
Os06t0655100-00	Rice	plastid	81.54	78.83
TraesCS2A01G508900.1	Wheat	plastid	70.1	69.64
TraesCS3A01G146800.1	Wheat	plastid	70.26	69.35
TraesCS1A01G221000.1	Wheat	plastid	64.54	67.75
KRH23702	Soybean	extracellular	61.27	63.99
TraesCS2A01G034900.1	Wheat	mitochondrion	16.83	31.79
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	15.2	29.43
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	15.85	28.96
TraesCS3A01G153500.1	Wheat	peroxisome	15.03	28.93
TraesCS7A01G538500.1	Wheat	cytosol	16.01	28.49
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	14.71	28.48
TraesCS2A01G035400.1	Wheat	mitochondrion	15.2	28.18
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	15.2	27.84
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	15.85	26.8
TraesCS6A01G000400.1	Wheat	peroxisome	15.36	24.35
TraesCS5A01G161300.1	Wheat	plastid	15.03	24.34
TraesCS7A01G232200.1	Wheat	golgi	14.05	22.81
TraesCS6A01G274900.1	Wheat	mitochondrion	11.27	18.3

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720	MapMan:4.1.4.1.1
InterPro:ACT_dom	InterPro:ASB_dom_sf	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004617	GO:GO:0005488	GO:GO:0006564
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:IPR002912	InterPro:IPR029009	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF01842
PFAM:PF02826	InterPro:PGDH	ScanProsite:PS00065	ScanProsite:PS00670	PFscan:PS51671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF4	SUPFAM:SSF143548	SUPFAM:SSF51735	SUPFAM:SSF52283	SUPFAM:SSF55021	TIGRFAMs:TIGR01327
EnsemblPlantsGene:TraesCS7A01G496500	EnsemblPlants:TraesCS7A01G496500.1	TIGR:cd04902	TIGR:cd12173	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:686233620..686236910

Molecular Weight (calculated)

64041.6 Da

IEP (calculated)

6.529

GRAVY (calculated)

0.199

Length

612 amino acids

Sequence
(BLAST)

001: MALATPLRHL LAAQPEPAAG AAPSLALTQP GRAFPPHRGV RFRARHAAAP LSSPPARAAG VAARAAGGGR PTVLVTEKLG AAGLELLRAF ANVDCAYELT
101: AEELRAKVSL VDALVVRSAT RVTREVFEAA RGRLRVVGRA GVGIDNVDLQ AATEAGCLVV NAPTANTVAA AEHAVALLAA MARNVAQADA SLKTGKWQRS
201: KYVGVSLVGK TIAIMGFGKV GSEVARRAKG LGMDVIAHDP YAPVDRARAI GVDLVSFDDA ISTADFISLH MPLTPSTTKI FNDETFAKMT KGVRLINVAR
301: GGVVDEEALL RALDNGTVAQ AALDVFFEEP PPKDSKLVHH ENVTVTPHLG ASTTEAQEGV ALEIAEAVIG ALKGELAATA VNAPMVSAEI LAELSPYVIL
401: AEKLGRLAVQ LVAGGSGIKA VKVVYSSARD PDDLDTRILR AMVTKGIVEP ISSAFVNIVN ADYVAKQRGL RIIEEQILLD GSPEVPINSI QVQLANVESK
501: FAGALSDDGD IRVEGKVKDG TPHLTLVGPF SVDVSLEGNL LLCRQVDQPG IIGKVGSILG TMNLNVNFMS VGRIAPGKQA IMAIGIDEEP DKEALKLIGE
601: TPSVQEFVFL KL

Best Arabidopsis Sequence Match ( AT1G17745.1 )
(BLAST)

001: MAFSSSCSSV KAVNSRWTSP SPSPSSRFAV LPAFLHRRYA TSVKLTAISA ALKTVEQTTL TEDNRFSTVG SDSDEYNPTL PKPRILVTEK LGEAGVNLLR
101: EFGDVDCSYD LSPEDLKKKV AESDALIVRS GTKVTREVFE AAKGRLKVVG RAGVGIDNVD LQAATEHGCL VVNAPTANTV AAAEHGIALL ASMARNVAQA
201: DASIKAGKWE RSKYVGVSLV GKTLAVMGFG KVGTEVARRA KGLGMTVISH DPYAPADRAR ALGVDLVSFD QAISTADFVS LHMPLTPATK KVFNDETFSK
301: MKKGVRLINV ARGGVIDEDA LVRALDAGIV AQAALDVFCE EPPSKDSRLI QHENVTVTPH LGASTKEAQE GVAIEIAEAV AGALKGELSA TAVNAPMVAP
401: EVLSELTPYI VLAEKLGRLA VQLASGGKGV QSIRVVYRSA RDRDDLDTRL LRAMITKGII EPISDSYVNL VNADFIAKQK GLRISEERMV VDSSPEYPVD
501: SIQVQILNVE SNFAGAVSDA GDISIEGKVK YGVPHLTCVG SFGVDVSLEG NLILCRQVDQ PGMIGQVGNI LGEQNVNVNF MSVGRTVLRK QAIMAIGVDE
601: EPDNKTLERI GGVSAIEEFV FLKL

Arabidopsis Description

PGDHD-3-phosphoglycerate dehydrogenase [Source:TAIR;Acc:AT1G17745]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.