Factsheet for Bra026966.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26572	Canola	cytosol	99.16	98.34
Bra019774.1-P	Field mustard	cytosol	79.92	55.36
AT1G12550.1	Thale cress	cytosol	73.22	54.18
HORVU2Hr1G005210.2	Barley	mitochondrion	49.37	42.6
Os11t0229100-01	Rice	extracellular	24.69	42.45
GSMUA_Achr5P14420_001	Banana	cytosol	56.07	40.61
KRH48312	Soybean	cytosol	56.49	40.06
Os04t0107200-01	Rice	mitochondrion	54.39	39.51
GSMUA_Achr5P14430_001	Banana	mitochondrion	50.21	39.47
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	47.28	38.97
KRH48311	Soybean	cytosol	53.97	38.62
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	51.05	38.61
Os04t0107500-01	Rice	plasma membrane	51.05	38.61
TraesCS2D01G030900.1	Wheat	cytosol	51.05	38.61
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	53.14	38.6
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	51.46	38.56
TraesCS2D01G034600.1	Wheat	mitochondrion	53.14	38.48
TraesCS2A01G035400.1	Wheat	mitochondrion	53.14	38.48
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	53.56	38.32
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	50.63	38.29
EES11740	Sorghum	mitochondrion	52.72	38.18
Zm00001d008883_P001	Maize	mitochondrion	52.72	38.18
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	53.14	38.02
Bra003537.1-P	Field mustard	cytosol	49.79	38.02
KRH48313	Soybean	cytosol	53.14	37.8
PGSC0003DMT400058520	Potato	cytosol	51.05	37.54
TraesCS2B01G048100.1	Wheat	plastid	53.14	36.92
VIT_02s0025g04730.t01	Wine grape	cytosol	48.54	36.59
Bra035206.1-P	Field mustard	cytosol	47.28	36.45
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	52.3	36.44
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	51.05	36.42
EES11738	Sorghum	cytosol	51.05	36.09
OQU81061	Sorghum	plastid	48.12	36.05
KRH48310	Soybean	cytosol	50.21	35.93
TraesCS2B01G048500.1	Wheat	cytosol	50.63	35.91
Zm00001d024906_P001	Maize	cytosol	49.37	35.87
OQU88433	Sorghum	cytosol	48.12	35.83
Zm00001d018790_P001	Maize	extracellular, plasma membrane	46.86	35.78
TraesCS7B01G456600.1	Wheat	cytosol, plastid	51.05	35.47
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	53.56	35.36
TraesCS2B01G048000.1	Wheat	mitochondrion	47.7	35.19
TraesCS2A01G034900.1	Wheat	mitochondrion	47.7	35.19
TraesCS7A01G538500.1	Wheat	cytosol	50.63	35.17
EES10352	Sorghum	cytosol, mitochondrion	49.37	34.91
TraesCS2D01G034100.1	Wheat	mitochondrion	47.28	34.88
TraesCS2D01G034300.1	Wheat	plastid	52.72	34.81
OQU81058	Sorghum	cytosol	48.54	34.63
KRH65201	Soybean	plastid	41.42	34.49
Zm00001d024907_P001	Maize	mitochondrion	48.54	34.42
EES10400	Sorghum	cytosol	48.54	34.32
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	56.9	34.26
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	51.05	34.17
Zm00001d004451_P001	Maize	cytosol	47.7	33.83
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	45.61	33.75
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	45.61	33.75
Os04t0107300-01	Rice	mitochondrion, plasma membrane	46.03	33.74
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	54.81	28.42
KRH65202	Soybean	cytosol	25.94	27.56
PGSC0003DMT400058518	Potato	cytosol	15.9	27.34
HORVU2Hr1G005150.2	Barley	plastid	36.82	24.65
GSMUA_Achr4P17980_001	Banana	cytosol	10.88	24.3
Bra035498.1-P	Field mustard	cytosol	9.62	23.47
HORVU4Hr1G086940.2	Barley	cytosol	11.3	20.93
Bra023487.1-P	Field mustard	mitochondrion	24.27	15.1
Bra004275.1-P	Field mustard	cytosol	23.85	14.77
Bra004055.1-P	Field mustard	cytosol	23.85	14.77
Bra008737.1-P	Field mustard	mitochondrion	23.43	14.58
Bra003888.1-P	Field mustard	mitochondrion	22.59	14.52
Bra001747.1-P	Field mustard	plastid	22.59	9.2
Bra017637.1-P	Field mustard	plastid	23.01	9.2
Bra016589.1-P	Field mustard	plastid	23.43	9.02
Bra034616.1-P	Field mustard	plastid	22.59	8.99
Bra011506.1-P	Field mustard	plastid	22.59	8.7
Bra034615.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra026966	EnsemblPlants:Bra026966.1	EnsemblPlants:Bra026966.1-P	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:M4EDV6
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI0002542889	SEG:seg	:	:	:

Description

AT1G12550 (E=8e-086) | oxidoreductase family protein

Coordinates

chrA09:-:34516423..34517294

Molecular Weight (calculated)

25926.4 Da

IEP (calculated)

7.822

GRAVY (calculated)

0.200

Length

239 amino acids

Sequence
(BLAST)

001: MDELLSRNYR ILNTHTSSDP LPVFLSRQAS SVRAFVNIAL LKIDADLLSH LPSLQLIVCT SVGTNHVDLA ECKRRGIAVT NAGEAFSEDV ADFAVGLLIS
101: VLRRIPAADR YVRSANWAKS GDFQLGIKLS GKRVGILGLG SIGSLIAKRL EPFGCIISYN STSQKQSIPY LYYPDVLSLA ANNDVIVLSC ALNDQTHHIV
201: NREVMEALGK NGVIINVGRG GLIDEKEMVF GQYCAACFS

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.