Factsheet for HORVU2Hr1G005230.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034600.1	Wheat	mitochondrion	90.09	93.64
TraesCS2A01G035400.1	Wheat	mitochondrion	88.34	91.82
TraesCS2B01G048500.1	Wheat	cytosol	88.92	90.5
HORVU2Hr1G005210.2	Barley	mitochondrion	69.68	86.28
HORVU4Hr1G086940.2	Barley	cytosol	32.36	86.05
Zm00001d024906_P001	Maize	cytosol	69.1	72.04
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	67.64	70.52
EES11738	Sorghum	cytosol	69.39	70.41
EES10400	Sorghum	cytosol	68.8	69.82
Zm00001d004451_P001	Maize	cytosol	68.51	69.73
EES10352	Sorghum	cytosol, mitochondrion	67.64	68.64
GSMUA_Achr4P17980_001	Banana	cytosol	19.83	63.55
GSMUA_Achr5P14420_001	Banana	cytosol	56.85	59.09
GSMUA_Achr5P14430_001	Banana	mitochondrion	51.02	57.57
PGSC0003DMT400058518	Potato	cytosol	22.74	56.12
Solyc08g080030.2.1	Tomato	cytosol	43.73	55.56
CDY54697	Canola	mitochondrion	23.32	54.05
CDY17092	Canola	cytosol	16.33	52.83
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	44.31	52.41
Bra026966.1-P	Field mustard	cytosol	36.44	52.3
CDY26572	Canola	cytosol	36.44	51.87
PGSC0003DMT400058520	Potato	cytosol	48.69	51.38
Bra035498.1-P	Field mustard	cytosol	14.58	51.02
CDY57070	Canola	cytosol	47.81	50.93
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	51.9	49.86
VIT_02s0025g04730.t01	Wine grape	cytosol	45.77	49.53
AT2G45630.2	Thale cress	plastid	48.1	48.82
CDY16011	Canola	cytosol, peroxisome, plastid	41.98	48.65
Bra019774.1-P	Field mustard	cytosol	48.69	48.41
CDX98054	Canola	cytosol	48.69	48.41
KRH48312	Soybean	cytosol	47.52	48.37
Solyc01g093990.2.1	Tomato	cytosol	43.44	46.13
CDY26571	Canola	plastid	39.36	45.61
KRH48311	Soybean	cytosol	44.02	45.21
KRH48313	Soybean	cytosol	43.73	44.64
CDY16012	Canola	cytosol, nucleus, peroxisome	31.2	44.4
HORVU2Hr1G005150.2	Barley	plastid	45.48	43.7
KRH48310	Soybean	cytosol	41.69	42.81
KRH65202	Soybean	cytosol	27.99	42.67
KRH65201	Soybean	plastid	34.11	40.77
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.44	37.53
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	37.9	32.75
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	44.61	31.48
HORVU6Hr1G017010.1	Barley	cytosol	9.33	29.91
CDY16010	Canola	cytosol, nucleus, plastid	47.23	29.4
CDY26570	Canola	cytosol	34.11	26.0
HORVU6Hr1G000650.2	Barley	peroxisome	13.12	23.32
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	22.16	20.16
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	22.45	19.35
HORVU7Hr1G111190.2	Barley	mitochondrion	23.62	15.34
HORVU6Hr1G000640.1	Barley	cytosol	13.12	14.85
HORVU1Hr1G056180.2	Barley	plastid	25.66	14.29
HORVU2Hr1G113180.3	Barley	cytosol	17.78	13.47

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A287GYM6	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G005230	EnsemblPlants:HORVU2Hr1G005230.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF207	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI000B47AAC0	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:11394522..11403493

Molecular Weight (calculated)

36307.7 Da

IEP (calculated)

6.346

GRAVY (calculated)

0.225

Length

343 amino acids

Sequence
(BLAST)

001: LCAPVVTTLE LAAMSAAGGK PHVLLLRPVD AAFAAALRDR YRVLDLYAPG QTLPVLAFVA AAAAVPEPPR ATVIWAGVRV DASFLDAAPS LRCVVSTAAG
101: LDHIDLAECA RRGVAVANSG EVYSTDVADH AVGLLLDVLR RVSASEQYVR RGSWPAQGDY PLGSKLGGKR VGIIGLGNIG SRIAKRLQAF GCIIHYNSRK
201: PKDSVSYKYF PNAHDLAAES DVLVVACALN KATQHIVNKD VLEALGKDGV VVNIGRGANI DEEELVIALR EGKIAGAGLD VFEHEPKVPA ELFSMDNVVL
301: SPHVAVFTEE SRSDLCLHTI GNLEAFFSGQ PLLTPVHADS LVQ

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.