Factsheet for HORVU2Hr1G113180.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57737	Canola	cytosol	30.46	80.7
TraesCS2A01G508900.1	Wheat	plastid	98.9	72.73
Zm00001d026472_P001	Maize	plastid	91.61	67.81
EES12983	Sorghum	plastid	92.49	67.58
Os04t0650800-01	Rice	plastid	90.95	67.21
HORVU7Hr1G111190.2	Barley	mitochondrion	77.92	66.86
Zm00001d002051_P001	Maize	plastid	92.05	66.61
KRG91030	Soybean	endoplasmic reticulum	84.77	64.54
KRH35731	Soybean	nucleus	84.33	64.31
PGSC0003DMT400059818	Potato	plastid	83.44	63.53
PGSC0003DMT400046698	Potato	plastid	83.89	63.33
AT4G34200.1	Thale cress	plastid	84.11	63.18
Solyc03g112070.2.1	Tomato	plastid	83.66	63.17
GSMUA_Achr4P11440_001	Banana	plastid	79.25	63.09
CDX75409	Canola	plastid	83.0	63.09
CDY49286	Canola	plastid	83.22	63.04
CDX72462	Canola	plastid	83.22	63.04
Bra017637.1-P	Field mustard	plastid	83.22	63.04
Solyc10g049890.1.1	Tomato	plastid	82.78	63.03
CDX76268	Canola	plastid	83.44	63.0
Bra034616.1-P	Field mustard	plastid	83.22	62.73
VIT_18s0001g09890.t01	Wine grape	plastid	83.0	62.15
Bra001747.1-P	Field mustard	plastid	80.35	62.01
CDY22972	Canola	plastid	80.35	62.01
CDX82295	Canola	plastid	80.13	61.84
AT3G19480.1	Thale cress	plastid	79.69	61.39
GSMUA_Achr4P04100_001	Banana	plastid	77.48	60.52
Bra011506.1-P	Field mustard	plastid	82.78	60.39
VIT_03s0180g00130.t01	Wine grape	cytosol	86.31	59.88
CDX69034	Canola	plastid	83.22	59.65
HORVU1Hr1G056180.2	Barley	plastid	79.03	58.12
CDY57736	Canola	plastid	43.71	51.97
HORVU6Hr1G017010.1	Barley	cytosol	7.51	31.78
HORVU4Hr1G086940.2	Barley	cytosol	8.61	30.23
HORVU6Hr1G000650.2	Barley	peroxisome	10.82	25.39
HORVU2Hr1G005210.2	Barley	mitochondrion	13.02	21.3
HORVU2Hr1G005150.2	Barley	plastid	15.23	19.33
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	15.23	19.33
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	13.47	17.78
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	14.79	16.83
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	13.47	16.18
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	14.57	13.58
HORVU6Hr1G000640.1	Barley	cytosol	8.17	12.21

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00270+3.3.1.1	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720
MapMan:4.1.4.1.1	UniProt:A0A287JHF7	InterPro:ACT_dom	InterPro:ASB_dom_sf	InterPro:Ado_hCys_hydrolase_NAD-bd	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004617	GO:GO:0005488	GO:GO:0006564	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G113180	EnsemblPlants:HORVU2Hr1G113180.3	InterPro:IPR002912	InterPro:IPR029009	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF01842	PFAM:PF02826	InterPro:PGDH	ScanProsite:PS00065	ScanProsite:PS00671	PFscan:PS51671
PANTHER:PTHR42938	PANTHER:PTHR42938:SF14	SMART:SM00997	SUPFAM:SSF143548	SUPFAM:SSF51735	SUPFAM:SSF55021
TIGRFAMs:TIGR01327	UniParc:UPI000B46BB5E	SEG:seg	:	:	:

Description

D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287JHF7]

Coordinates

chrchr2H:+:727569371..727572003

Molecular Weight (calculated)

47542.9 Da

IEP (calculated)

5.351

GRAVY (calculated)

0.238

Length

453 amino acids

Sequence
(BLAST)

001: VNAPTANTVA AAEHGIALMC AMARNVAQAD ASLKAGKWAR TKYVGVSLVG KTLAILGFGK VGSEVARRAK GLGMHVIAHD PYASADRARA IGVDLVSMEE
101: AMTTADFISL HMPLTPSTNK MLNDEAFAKM KKGVRIINVA RGGVIDEDAL VRALDAGIVA QAALDVFTKE PPAADSKLVL HENVTVTPHL GASTVEAQEG
201: VAIEIAEAVT GALKGELAAS AVNAPMVPAE VLSELAPYVV LAEKLGRLAV QLVAGGGGIK SVKVTYASAR APDDLDTRLL RAMITKGVIE PISDVFVNLV
301: NADFTAKQRG IRVSEEKIVM DGSPETPLEY IQVQIANVES KFPSAICDSG FVTVEGRVKD GIPHLTKVGA FEVDVSMEGS LILCRQVDQP GMIGSVGSVL
401: GEENVNVSFM SVGRIAPRKT AIMAIGVDEE PSKTTLTKIG EIPAIEEFVF LKL

Best Arabidopsis Sequence Match ( AT4G34200.1 )
(BLAST)

001: MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS
101: LCDALIVRSG TKVGREVFES SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD ASVKAGEWKR NKYVGVSLVG
201: KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL
301: VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV
401: QLVAGGSGVK NAKITYASAR ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET ITVQLSNVES KFASSLSESG
501: EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF
601: LKL

Arabidopsis Description

PGDH1D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UWV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.