Factsheet for AT4G34200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72462	Canola	plastid	93.2	93.98
CDY49286	Canola	plastid	93.03	93.81
Bra017637.1-P	Field mustard	plastid	92.87	93.65
HORVU2Hr1G113180.3	Barley	cytosol	63.18	84.11
KRH35731	Soybean	nucleus	79.6	80.81
PGSC0003DMT400059818	Potato	plastid	79.1	80.17
KRG91030	Soybean	endoplasmic reticulum	79.1	80.17
Solyc10g049890.1.1	Tomato	plastid	78.94	80.0
AT3G19480.1	Thale cress	plastid	74.63	76.53
GSMUA_Achr4P11440_001	Banana	plastid	70.65	74.87
Os04t0650800-01	Rice	plastid	75.95	74.71
EES12983	Sorghum	plastid	76.29	74.19
Zm00001d026472_P001	Maize	plastid	75.29	74.18
TraesCS2A01G508900.1	Wheat	plastid	75.29	73.7
GSMUA_Achr4P04100_001	Banana	plastid	70.65	73.45
VIT_03s0180g00130.t01	Wine grape	cytosol	79.27	73.2
Zm00001d002051_P001	Maize	plastid	75.62	72.84
AT1G17745.2	Thale cress	plastid	70.81	65.59
AT1G68010.2	Thale cress	cytosol	16.58	25.84
AT2G45630.2	Thale cress	plastid	13.93	24.85
AT1G72190.1	Thale cress	mitochondrion	15.26	24.66
AT1G79870.1	Thale cress	cytosol	12.6	24.28
AT1G12550.1	Thale cress	cytosol	12.94	24.15
AT5G14780.1	Thale cress	mitochondrion	14.26	22.4

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00270+3.3.1.1	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720
MapMan:4.1.4.1.1	EntrezGene:829568	UniProt:A0A178UWV4	InterPro:ACT_dom	ProteinID:AEE86339.1	InterPro:ASB_dom_sf
ArrayExpress:AT4G34200	EnsemblPlantsGene:AT4G34200	RefSeq:AT4G34200	TAIR:AT4G34200	RefSeq:AT4G34200-TAIR-G	EnsemblPlants:AT4G34200.1
TAIR:AT4G34200.1	EMBL:AY063810	EMBL:AY084236	EMBL:AY150462	InterPro:Ado_hCys_hydrolase_NAD-bd	Unigene:At.21335
ProteinID:CAA17552.1	ProteinID:CAB80137.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd
Symbol:EDA9	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004617
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006564	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009555	GO:GO:0009561	GO:GO:0009570
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:IPR002912	InterPro:IPR029009	InterPro:NAD(P)-bd_dom_sf
RefSeq:NP_195146.1	UniProt:O49485	ProteinID:OAO98368.1	PFAM:PF00389	PFAM:PF01842	PFAM:PF02826
InterPro:PGDH	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170	PO:PO:0001185	PO:PO:0004507
PO:PO:0005020	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00065
ScanProsite:PS00670	ScanProsite:PS00671	PFscan:PS51671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF14	SMART:SM00997
SUPFAM:SSF143548	SUPFAM:SSF51735	SUPFAM:SSF52283	SUPFAM:SSF55021	TIGRFAMs:TIGR01327	UniParc:UPI00000AC4C1
SEG:seg	:	:	:	:	:

Description

PGDH1D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UWV4]

Coordinates

chr4:-:16373731..16376666

Molecular Weight (calculated)

63328.7 Da

IEP (calculated)

6.532

GRAVY (calculated)

0.161

Length

603 amino acids

Sequence
(BLAST)

001: MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS
101: LCDALIVRSG TKVGREVFES SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD ASVKAGEWKR NKYVGVSLVG
201: KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL
301: VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV
401: QLVAGGSGVK NAKITYASAR ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET ITVQLSNVES KFASSLSESG
501: EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF
601: LKL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.