Factsheet for AT3G19480.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82295	Canola	plastid	93.71	93.87
Bra001747.1-P	Field mustard	plastid	92.86	93.02
CDY22972	Canola	plastid	92.86	93.02
KRG91030	Soybean	endoplasmic reticulum	81.12	80.17
HORVU2Hr1G113180.3	Barley	cytosol	61.39	79.69
KRH35731	Soybean	nucleus	80.44	79.63
PGSC0003DMT400059818	Potato	plastid	76.7	75.8
Solyc10g049890.1.1	Tomato	plastid	76.36	75.46
AT4G34200.1	Thale cress	plastid	76.53	74.63
Zm00001d026472_P001	Maize	plastid	77.21	74.18
EES12983	Sorghum	plastid	78.06	74.03
Os04t0650800-01	Rice	plastid	77.04	73.9
Zm00001d002051_P001	Maize	plastid	77.89	73.16
GSMUA_Achr4P11440_001	Banana	plastid	70.58	72.94
VIT_03s0180g00130.t01	Wine grape	cytosol	79.93	71.98
GSMUA_Achr4P04100_001	Banana	plastid	70.92	71.9
TraesCS2A01G508900.1	Wheat	plastid	74.49	71.1
AT1G17745.2	Thale cress	plastid	70.24	63.44
AT1G68010.2	Thale cress	cytosol	17.69	26.87
AT2G45630.2	Thale cress	plastid	15.14	26.33
AT1G12550.1	Thale cress	cytosol	13.61	24.77
AT1G79870.1	Thale cress	cytosol	12.93	24.28
AT1G72190.1	Thale cress	mitochondrion	15.14	23.86
AT5G14780.1	Thale cress	mitochondrion	13.27	20.31

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00270+3.3.1.1	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720
MapMan:4.1.4.1.1	EntrezGene:821482	InterPro:ACT_dom	ProteinID:AEE76246.1	InterPro:ASB_dom_sf	ArrayExpress:AT3G19480
EnsemblPlantsGene:AT3G19480	RefSeq:AT3G19480	TAIR:AT3G19480	RefSeq:AT3G19480-TAIR-G	EnsemblPlants:AT3G19480.1	TAIR:AT3G19480.1
EMBL:AY042858	InterPro:Ado_hCys_hydrolase_NAD-bd	Unigene:At.68436	ProteinID:BAB02473.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004617
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006564	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:IPR002912	InterPro:IPR029009	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_566637.2	PFAM:PF00389
PFAM:PF01842	PFAM:PF02826	InterPro:PGDH	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001185	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671
PFscan:PS51671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF14	UniProt:Q9LT69	SMART:SM00997	SUPFAM:SSF143548
SUPFAM:SSF51735	SUPFAM:SSF52283	SUPFAM:SSF55021	TIGRFAMs:TIGR01327	UniParc:UPI00000A7060	SEG:seg

Description

PGDH3D-3-phosphoglycerate dehydrogenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LT69]

Coordinates

chr3:+:6752422..6754785

Molecular Weight (calculated)

62125.8 Da

IEP (calculated)

8.440

GRAVY (calculated)

0.238

Length

588 amino acids

Sequence
(BLAST)

001: MATSLNLSSI FSSSSRLVTT PSSVFPIRQR RRIILVTSSS SGGGGKPTIL VTEKLGQAGI DLLKKYANVD CSYDLSLEEL CTKISLCDAL IVRSGTKVGR
101: DVFESSRGRL KVVGRAGVGI DNVDLAAATE YGCLVVNAPT ANTVAAAEHG IALLTAMARN IAQADASIKA GKWTRNKYVG VSLVGKTLAV LGFGKVGSEV
201: ARRARGLGMH VITHDPYAPA DRARAIGVEL VSFEVAISTA DFISLHLPLT AATSKMMNDV TFAMMKKGVR IVNVARGGVI DEEALLRALD SGIVAQAALD
301: VFTVEPPVKD NKLVLHESVT ATPHLGASTM EAQEGVSIEV AEAVIGALRG ELAATAVNAP MVPLEVLREL KPYVVLAEKL GRLAVQLVTG GSGVNAVKVT
401: YASSRAPDDL DTRLLRAMVI KGIIEPISSV FINLVNSDYI AKQRGVKISE ERMVLDGSPE NPIEYITVRI ANVESRFASA LSESGEIKVE GRVKQGVPSL
501: TKVGLFGVDV SLEGSVILCR QVDQPGMIGK VASILGDENV NVSFMSVGRI APGKQAVMAI GVDEQPSKET LKKIGDIPAI EEFVFLKL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.