Factsheet for TraesCS2D01G034000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	91.54	81.79
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	78.68	79.43
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	77.74	78.48
TraesCS2D01G030900.1	Wheat	cytosol	72.41	73.1
Zm00001d018790_P001	Maize	extracellular, plasma membrane	69.91	71.25
Os04t0107500-01	Rice	plasma membrane	68.65	69.3
OQU81061	Sorghum	plastid	67.4	67.4
OQU88433	Sorghum	cytosol	67.71	67.29
Bra035498.1-P	Field mustard	cytosol	18.18	59.18
GSMUA_Achr4P17980_001	Banana	cytosol	19.75	58.88
CDY17092	Canola	cytosol	19.44	58.49
CDY54697	Canola	mitochondrion	26.96	58.11
PGSC0003DMT400058518	Potato	cytosol	24.76	56.83
CDY57070	Canola	cytosol	54.23	53.73
GSMUA_Achr5P14420_001	Banana	cytosol	55.17	53.33
Solyc08g080030.2.1	Tomato	cytosol	44.83	52.96
TraesCS2D01G034100.1	Wheat	mitochondrion	53.6	52.78
GSMUA_Achr5P14430_001	Banana	mitochondrion	49.22	51.64
TraesCS2D01G034600.1	Wheat	mitochondrion	53.29	51.52
Bra026966.1-P	Field mustard	cytosol	38.56	51.46
CDY26572	Canola	cytosol	38.56	51.04
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	46.4	51.03
Bra019774.1-P	Field mustard	cytosol	55.17	51.01
CDX98054	Canola	cytosol	55.17	51.01
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	52.98	50.6
TraesCS3D01G160800.1	Wheat	cytosol	48.9	49.06
CDY16011	Canola	cytosol, peroxisome, plastid	45.14	48.65
VIT_02s0025g04730.t01	Wine grape	cytosol	47.96	48.27
PGSC0003DMT400058520	Potato	cytosol	48.9	48.0
KRH48313	Soybean	cytosol	46.71	44.35
AT2G45630.2	Thale cress	plastid	46.71	44.08
CDY26571	Canola	plastid	40.75	43.92
KRH48312	Soybean	cytosol	46.4	43.92
Solyc01g093990.2.1	Tomato	cytosol	44.2	43.65
KRH48311	Soybean	cytosol	45.45	43.41
TraesCS2D01G034300.1	Wheat	plastid	48.9	43.09
CDY16012	Canola	cytosol, nucleus, peroxisome	32.29	42.74
KRH65202	Soybean	cytosol	29.47	41.78
KRH48310	Soybean	cytosol	42.63	40.72
KRH65201	Soybean	plastid	35.74	39.72
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	44.51	35.77
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	48.59	33.62
CDY16010	Canola	cytosol, nucleus, plastid	52.04	30.13
CDY26570	Canola	cytosol	36.68	26.0
TraesCS6D01G001700.1	Wheat	golgi, plastid	26.33	21.76
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	22.26	19.35
TraesCS4D01G007200.1	Wheat	golgi	22.57	19.2
TraesCS6D01G255200.2	Wheat	mitochondrion	22.57	19.1
TraesCS7D01G232300.1	Wheat	mitochondrion	22.26	18.83
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	21.0	17.72
TraesCS7D01G483800.1	Wheat	plastid	30.41	15.9
TraesCS1D01G222600.2	Wheat	plastid	28.21	14.54
TraesCS3D01G160900.1	Wheat	cytosol	4.39	7.53

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF147
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2D01G034000	EnsemblPlants:TraesCS2D01G034000.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2D:-:13191419..13192546

Molecular Weight (calculated)

33296.1 Da

IEP (calculated)

4.762

GRAVY (calculated)

0.267

Length

319 amino acids

Sequence
(BLAST)

001: MRPPARTQAD ASKPVVLLAD PIIPEFELEL SARYSLLPLA DVDADTAASA RALLTVELPA VSAELMGALP KLELVLASSV GVDHVDLAAC RRRRIAVTNA
101: GDAFSDDAAD YGVGLVIAAL RRVAAADAYV RRGGWPAGGD YPLATKVSGK RVGIVGLGNI GSRIARRLAA FGCAVSYNSR SPKPSAPYEF VPAVRDIAAG
201: SDVLVLSCAL TEETRHVVNR EVMEALGKAG VLVNVGRGGL VDEPELVRCL QEGVIGGAGL DVFESEPDVP PELFSMDNVV LSAHRAVATP ESIRGTIELV
301: AANLDAFFAG KPLLSPVEL

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.