CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045965_P001	Maize	mitochondrion	98.14	98.14
Zm00001d011368_P001	Maize	cytosol	74.73	97.23
Zm00001d011367_P001	Maize	cytosol	74.73	97.23
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	72.07	96.1
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	94.41	94.16
TraesCS7B01G130600.1	Wheat	mitochondrion	94.41	94.16
TraesCS7D01G232300.1	Wheat	mitochondrion	94.41	94.16
TraesCS7A01G232200.1	Wheat	golgi	94.15	93.9
Os06t0486800-01	Rice	mitochondrion	93.88	93.88
Zm00001d053924_P001	Maize	cytosol	56.91	90.68
TraesCS4D01G007200.1	Wheat	golgi	86.17	86.4
Zm00001d014163_P001	Maize	mitochondrion	55.59	86.36
TraesCS4B01G066400.1	Wheat	mitochondrion	80.85	85.63
VIT_14s0066g01320.t01	Wine grape	mitochondrion	85.37	83.81
KRG93315	Soybean	mitochondrion	81.91	82.13
GSMUA_Achr3P01200_001	Banana	mitochondrion	83.51	81.98
EES07384	Sorghum	mitochondrion	82.98	81.25
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	82.98	80.41
Solyc02g086880.2.1	Tomato	plastid	81.38	80.31
PGSC0003DMT400001303	Potato	mitochondrion	81.38	80.31
KRG93317	Soybean	nucleus	82.98	80.21
CDY09885	Canola	mitochondrion	81.12	79.63
Bra008737.1-P	Field mustard	mitochondrion	81.12	79.43
AT5G14780.1	Thale cress	mitochondrion	81.12	79.43
CDX69558	Canola	mitochondrion	80.85	79.17
CDX85582	Canola	mitochondrion	79.79	78.33
Bra023487.1-P	Field mustard	mitochondrion	79.52	77.86
CDX91020	Canola	mitochondrion	78.72	77.08
Zm00001d004323_P001	Maize	mitochondrion	27.39	71.03
Zm00001d019818_P001	Maize	mitochondrion	26.6	68.97
Zm00001d033618_P001	Maize	cytosol	70.21	68.57
OQU81061	Sorghum	plastid	21.81	25.71
OQU88433	Sorghum	cytosol	20.74	24.3
EES11740	Sorghum	mitochondrion	21.28	24.24
EES11738	Sorghum	cytosol	21.01	23.37
EES10400	Sorghum	cytosol	21.01	23.37
EES10352	Sorghum	cytosol, mitochondrion	20.74	23.08
OQU81058	Sorghum	cytosol	20.48	22.99
KXG31500	Sorghum	cytosol	18.88	22.54
EER96197	Sorghum	mitochondrion	22.87	22.34
KXG34859	Sorghum	mitochondrion, plastid	21.28	20.83
KXG29243	Sorghum	cytosol	21.01	20.73
EES15079	Sorghum	plastid	22.87	13.89
EES12983	Sorghum	plastid	22.61	13.71
EER90146	Sorghum	mitochondrion, plastid	22.07	13.54

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	EntrezGene:8072945	UniProt:C5Z2Z6
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	EnsemblPlants:EER89775	ProteinID:EER89775
ProteinID:EER89775.1	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150
GO:GO:0008152	GO:GO:0008863	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616
GO:GO:0042183	GO:GO:0051287	GO:GO:0055114	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1
MetaCyc:PWY-1881	MetaCyc:PWY-5497	MetaCyc:PWY-6696	EnsemblPlantsGene:SORBI_3010G141600	SUPFAM:SSF51735	SUPFAM:SSF52283
unigene:Sbi.3340	UniParc:UPI0001A896AD	RefSeq:XP_002438408.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:35334842..35356397

Molecular Weight (calculated)

41376.7 Da

IEP (calculated)

6.704

GRAVY (calculated)

-0.234

Length

376 amino acids

Sequence
(BLAST)

001: MAMWRAAARQ LVDRALGSSA AHTSAGSKKI VGVFYKAGEY ADKNPNFVGC VEGALGIRGW LESQGHQYIV TDDKEGPNCE LEKHIEDMHV LITTPFHPAY
101: VTAERIKKAK NLELLLTAGI GSDHIDLPAA AAAGLTVAEV TGSNTVSVAE DELLRILILL RNFLPGYQQV VQGEWNVAGI AHRAYDLEGK TVGTVGAGRI
201: GRLLLQRLKP FNCNLLYHDR LQIDPELEKE IGAKFEEDLD AMLPKCDVIV INTPLTEKTR GMFNKERIAK MKKGVIIVNN ARGAIMDTQA VADACSSGHI
301: AGYGGDVWFP QPAPKDHPWR YMPNHAMTPH ISGTTIDAQL RYAEGARDML DRYFKGEDFP VHNYIVKEGQ LASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.