Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019818_P001 | Maize | mitochondrion | 95.86 | 95.86 |
| Zm00001d014163_P001 | Maize | mitochondrion | 64.83 | 38.84 |
| Zm00001d017801_P001 | Maize | mitochondrion | 44.14 | 37.21 |
| Zm00001d011368_P001 | Maize | cytosol | 66.9 | 33.56 |
| Zm00001d011367_P001 | Maize | cytosol | 66.9 | 33.56 |
| Zm00001d006877_P001 | Maize | cytosol, mitochondrion, plastid | 62.76 | 32.27 |
| Zm00001d045965_P001 | Maize | mitochondrion | 74.48 | 28.72 |
| Os06t0486800-01 | Rice | mitochondrion | 71.03 | 27.39 |
| EER89775 | Sorghum | mitochondrion | 71.03 | 27.39 |
| TraesCS4B01G066400.1 | Wheat | mitochondrion | 65.52 | 26.76 |
| HORVU7Hr1G047700.3 | Barley | mitochondrion, plasma membrane | 68.28 | 26.26 |
| TraesCS7A01G232200.1 | Wheat | golgi | 68.28 | 26.26 |
| TraesCS7B01G130600.1 | Wheat | mitochondrion | 68.28 | 26.26 |
| TraesCS7D01G232300.1 | Wheat | mitochondrion | 68.28 | 26.26 |
| KRG93315 | Soybean | mitochondrion | 66.21 | 25.6 |
| TraesCS4D01G007200.1 | Wheat | golgi | 66.21 | 25.6 |
| VIT_14s0066g01320.t01 | Wine grape | mitochondrion | 67.59 | 25.59 |
| GSMUA_Achr3P01200_001 | Banana | mitochondrion | 64.83 | 24.54 |
| KRH20294 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 65.52 | 24.48 |
| KRG93317 | Soybean | nucleus | 65.52 | 24.42 |
| Solyc02g086880.2.1 | Tomato | plastid | 62.07 | 23.62 |
| PGSC0003DMT400001303 | Potato | mitochondrion | 62.07 | 23.62 |
| CDY09885 | Canola | mitochondrion | 60.0 | 22.72 |
| Bra008737.1-P | Field mustard | mitochondrion | 60.0 | 22.66 |
| CDX69558 | Canola | mitochondrion | 60.0 | 22.66 |
| AT5G14780.1 | Thale cress | mitochondrion | 58.62 | 22.14 |
| CDX85582 | Canola | mitochondrion | 57.93 | 21.93 |
| Bra023487.1-P | Field mustard | mitochondrion | 57.93 | 21.88 |
| CDX91020 | Canola | mitochondrion | 56.55 | 21.35 |
| Zm00001d033618_P001 | Maize | cytosol | 46.21 | 17.4 |
| Zm00001d053924_P001 | Maize | cytosol | 28.28 | 17.37 |
| Zm00001d024906_P001 | Maize | cytosol | 20.69 | 9.12 |
| Zm00001d005489_P006 | Maize | mitochondrion | 24.14 | 8.95 |
| Zm00001d008883_P001 | Maize | mitochondrion | 18.62 | 8.18 |
| Zm00001d024907_P001 | Maize | mitochondrion | 18.62 | 8.01 |
| Zm00001d004451_P001 | Maize | cytosol | 18.62 | 8.01 |
| Zm00001d018790_P001 | Maize | extracellular, plasma membrane | 17.24 | 7.99 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 14.48 | 6.56 |
| Zm00001d014919_P002 | Maize | mitochondrion | 17.93 | 6.02 |
| Zm00001d002051_P001 | Maize | plastid | 23.45 | 5.43 |
| Zm00001d026472_P001 | Maize | plastid | 22.76 | 5.39 |
| Zm00001d046923_P001 | Maize | plastid | 20.69 | 5.09 |
| Zm00001d032114_P001 | Maize | plastid | 22.07 | 4.86 |
Protein Annotations
| EnsemblPlants:Zm00001d004323_P001 | EnsemblPlants:Zm00001d004323_T001 | EnsemblPlantsGene:Zm00001d004323 | Gene3D:3.40.50.720 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0051287 | GO:GO:0055114 | InterPro:D-isomer_DH_CS |
| InterPro:D-isomer_DH_NAD-bd | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR42938 | PANTHER:PTHR42938:SF1 | PFAM:PF02826 | ProteinID:ONM18725.1 |
| ScanProsite:PS00671 | SUPFAM:SSF51735 | UniParc:UPI00084552A0 | UniProt:A0A1D6EET5 | MapMan:35.1 | : |
Description
Formate dehydrogenase chloroplastic/mitochondrial
Coordinates
chr2:+:103087361..103088798
Molecular Weight (calculated)
15871.9 Da
IEP (calculated)
6.956
GRAVY (calculated)
-0.383
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGGGAYLN LKPGRTTADE TLAVEQIRKE ERGMPALAPF PFGNVAWMKK GVIVVNNARG AIMDAQAVAD ACSSGHIAAS TKGSDHPWRY MPNHAMTPHI
101: SGTTIDAQLR YADGVRDMLD RYFKGEDFPV QNYIVKEGQL ASQYQ
101: SGTTIDAQLR YADGVRDMLD RYFKGEDFPV QNYIVKEGQL ASQYQ
001: MIFQSFSLLN LLMKQASSGD SKKIVGVFYK ANEYATKNPN FLGCVENALG IRDWLESQGH QYIVTDDKEG PDCELEKHIP DLHVLISTPF HPAYVTAERI
101: KKAKNLKLLL TAGIGSDHID LQAAAAAGLT VAEVTGSNVV SVAEDELMRI LILMRNFVPG YNQVVKGEWN VAGIAYRAYD LEGKTIGTVG AGRIGKLLLQ
201: RLKPFGCNLL YHDRLQMAPE LEKETGAKFV EDLNEMLPKC DVIVINMPLT EKTRGMFNKE LIGKLKKGVL IVNNARGAIM ERQAVVDAVE SGHIGGYSGD
301: VWDPQPAPKD HPWRYMPNQA MTPHTSGTTI DAQLRYAAGT KDMLERYFKG EDFPTENYIV KDGELAPQYR
101: KKAKNLKLLL TAGIGSDHID LQAAAAAGLT VAEVTGSNVV SVAEDELMRI LILMRNFVPG YNQVVKGEWN VAGIAYRAYD LEGKTIGTVG AGRIGKLLLQ
201: RLKPFGCNLL YHDRLQMAPE LEKETGAKFV EDLNEMLPKC DVIVINMPLT EKTRGMFNKE LIGKLKKGVL IVNNARGAIM ERQAVVDAVE SGHIGGYSGD
301: VWDPQPAPKD HPWRYMPNQA MTPHTSGTTI DAQLRYAAGT KDMLERYFKG EDFPTENYIV KDGELAPQYR
Arabidopsis Description
FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.