Factsheet for Zm00001d011368_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011367_P001	Maize	cytosol	100.0	100.0
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	95.16	97.52
Zm00001d053924_P001	Maize	cytosol	75.09	91.95
Zm00001d014163_P001	Maize	mitochondrion	70.59	84.3
Zm00001d045965_P001	Maize	mitochondrion	98.96	76.06
EER89775	Sorghum	mitochondrion	97.23	74.73
Os06t0486800-01	Rice	mitochondrion	94.81	72.87
TraesCS7D01G232300.1	Wheat	mitochondrion	94.81	72.68
TraesCS7B01G130600.1	Wheat	mitochondrion	94.81	72.68
TraesCS7A01G232200.1	Wheat	golgi	94.81	72.68
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	94.46	72.41
TraesCS4D01G007200.1	Wheat	golgi	90.66	69.87
TraesCS4B01G066400.1	Wheat	mitochondrion	83.74	68.17
Zm00001d004323_P001	Maize	mitochondrion	33.56	66.9
VIT_14s0066g01320.t01	Wine grape	mitochondrion	87.54	66.06
KRG93315	Soybean	mitochondrion	85.47	65.87
Zm00001d019818_P001	Maize	mitochondrion	32.87	65.52
KRG93317	Soybean	nucleus	87.89	65.3
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	87.54	65.21
GSMUA_Achr3P01200_001	Banana	mitochondrion	86.16	65.01
PGSC0003DMT400001303	Potato	mitochondrion	84.43	64.04
Solyc02g086880.2.1	Tomato	plastid	84.43	64.04
Zm00001d033618_P001	Maize	cytosol	83.74	62.86
CDY09885	Canola	mitochondrion	83.05	62.66
Bra008737.1-P	Field mustard	mitochondrion	83.05	62.5
AT5G14780.1	Thale cress	mitochondrion	83.05	62.5
CDX69558	Canola	mitochondrion	82.7	62.24
CDX85582	Canola	mitochondrion	81.31	61.36
Bra023487.1-P	Field mustard	mitochondrion	81.31	61.2
CDX91020	Canola	mitochondrion	80.28	60.42
Zm00001d017801_P001	Maize	mitochondrion	21.8	36.63
Zm00001d018790_P001	Maize	extracellular, plasma membrane	24.91	23.0
Zm00001d024906_P001	Maize	cytosol	25.95	22.8
Zm00001d008883_P001	Maize	mitochondrion	24.22	21.21
Zm00001d004451_P001	Maize	cytosol	24.57	21.07
Zm00001d024907_P001	Maize	mitochondrion	24.22	20.77
Zm00001d030544_P001	Maize	cytosol, extracellular	22.15	20.0
Zm00001d005489_P006	Maize	mitochondrion	25.95	19.18
Zm00001d014919_P002	Maize	mitochondrion	23.18	15.51
Zm00001d046923_P001	Maize	plastid	23.88	11.71
Zm00001d026472_P001	Maize	plastid	24.57	11.6
Zm00001d002051_P001	Maize	plastid	24.91	11.5
Zm00001d032114_P001	Maize	plastid	25.26	11.08

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.16	UniProt:A0A1D6FZH4	ProteinID:AQK96688.1	ProteinID:AQK96689.1	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670
ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0008447464
EnsemblPlantsGene:Zm00001d011368	EnsemblPlants:Zm00001d011368_P001	EnsemblPlants:Zm00001d011368_T001	SEG:seg	:	:

Description

Formate dehydrogenase chloroplastic/mitochondrial

Coordinates

chr8:+:148751586..148753559

Molecular Weight (calculated)

31961.6 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.185

Length

289 amino acids

Sequence
(BLAST)

001: MHVLITTPFH PAYVTAERIK KAKNLELLLT AGIGSDHIDL PAAAAAGLTV AEVTGSNTVS VAEDELLRIL ILLRNFLPGY QQVVQGEWNV AGIAHKAYDL
101: EGKTVGTVGA GRIGRLLLQR LKPFNCNLLY HDRLQIDPEL EKEIGAKFEE DLDAMLPKCD VIVINTPLTE KTRGMFNKER IAKMKKGVIV VNNARGAIMD
201: ARAVADACSS GHIAGYGGDV WFPQPAPKDH PWRYMPNHAM TPHISGTTID EQLRYADGVR DMLDRYFKGE DFPVQNYIVK EGQLASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.