Factsheet for Zm00001d006877_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011368_P001	Maize	cytosol	97.52	95.16
Zm00001d011367_P001	Maize	cytosol	97.52	95.16
Zm00001d053924_P001	Maize	cytosol	75.18	89.83
Zm00001d014163_P001	Maize	mitochondrion	70.21	81.82
Zm00001d045965_P001	Maize	mitochondrion	97.87	73.4
EER89775	Sorghum	mitochondrion	96.1	72.07
TraesCS7D01G232300.1	Wheat	mitochondrion	94.33	70.56
TraesCS7B01G130600.1	Wheat	mitochondrion	94.33	70.56
TraesCS7A01G232200.1	Wheat	golgi	94.33	70.56
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	93.97	70.29
Os06t0486800-01	Rice	mitochondrion	93.62	70.21
TraesCS4D01G007200.1	Wheat	golgi	90.07	67.73
TraesCS4B01G066400.1	Wheat	mitochondrion	83.69	66.48
KRG93315	Soybean	mitochondrion	84.75	63.73
VIT_14s0066g01320.t01	Wine grape	mitochondrion	86.17	63.45
KRG93317	Soybean	nucleus	87.23	63.24
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	86.88	63.14
Zm00001d004323_P001	Maize	mitochondrion	32.27	62.76
GSMUA_Achr3P01200_001	Banana	mitochondrion	84.75	62.4
PGSC0003DMT400001303	Potato	mitochondrion	84.04	62.2
Solyc02g086880.2.1	Tomato	plastid	84.04	62.2
Zm00001d033618_P001	Maize	cytosol	84.75	62.08
CDY09885	Canola	mitochondrion	82.62	60.84
Zm00001d019818_P001	Maize	mitochondrion	31.21	60.69
Bra008737.1-P	Field mustard	mitochondrion	82.62	60.68
AT5G14780.1	Thale cress	mitochondrion	82.62	60.68
CDX69558	Canola	mitochondrion	82.27	60.42
CDX85582	Canola	mitochondrion	81.21	59.79
Bra023487.1-P	Field mustard	mitochondrion	81.21	59.64
CDX91020	Canola	mitochondrion	80.14	58.85
Zm00001d017801_P001	Maize	mitochondrion	20.57	33.72
Zm00001d024906_P001	Maize	cytosol	26.24	22.49
Zm00001d018790_P001	Maize	extracellular, plasma membrane	24.11	21.73
Zm00001d008883_P001	Maize	mitochondrion	24.11	20.61
Zm00001d004451_P001	Maize	cytosol	24.47	20.47
Zm00001d024907_P001	Maize	mitochondrion	24.11	20.18
Zm00001d030544_P001	Maize	cytosol, extracellular	22.34	19.69
Zm00001d005489_P006	Maize	mitochondrion	25.89	18.67
Zm00001d014919_P002	Maize	mitochondrion	23.05	15.05
Zm00001d046923_P001	Maize	plastid	24.11	11.54
Zm00001d026472_P001	Maize	plastid	24.82	11.44
Zm00001d002051_P001	Maize	plastid	25.18	11.34
Zm00001d032114_P001	Maize	plastid	25.53	10.93

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.16	UniProt:A0A1D6F1R2	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
ProteinID:ONM25378.1	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671
PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000844B795	EnsemblPlantsGene:Zm00001d006877
EnsemblPlants:Zm00001d006877_P001	EnsemblPlants:Zm00001d006877_T001	SEG:seg	:	:	:

Description

Formate dehydrogenase chloroplastic/mitochondrial

Coordinates

chr2:-:218344704..218346675

Molecular Weight (calculated)

31203.7 Da

IEP (calculated)

7.301

GRAVY (calculated)

-0.173

Length

282 amino acids

Sequence
(BLAST)

001: MHVRITTPFH PAYVTAERIK KAKNLEFLLT AGIGSDHIDL PAAAAAGLTV AEVTGSNTVS VAGDELLRIL ILLRNFLPGY QQVVQDEWNV AGIAHRAYDL
101: EGKTVGTVGA GRIGRLLLQR LKPFNCNLLY HDRLQIDPEL EKEIGVKFEE DLDAMLPKCD VIVINTPLTE KTRGMFNKER IAKMKKGVIV VNNARGAIMD
201: ARAVADACSS GHIAGYGGDV WFPQPAPKDH PWRYMPNHAM TPHISGTTID AQLRYADGVR DMLDRYFKGE DFPVQNYIVK EG

Best Arabidopsis Sequence Match ( AT5G14780.2 )
(BLAST)

001: MIFQSFSLLN LLMKQASSGD SKKIVGVFYK ANEYATKNPN FLGCVENALG IRDWLESQGH QYIVTDDKEG PDCELEKHIP DLHVLISTPF HPAYVTAERI
101: KKAKNLKLLL TAGIGSDHID LQAAAAAGLT VAEVTGSNVV SVAEDELMRI LILMRNFVPG YNQVVKGEWN VAGIAYRAYD LEGKTIGTVG AGRIGKLLLQ
201: RLKPFGCNLL YHDRLQMAPE LEKETGAKFV EDLNEMLPKC DVIVINMPLT EKTRGMFNKE LIGKLKKGVL IVNNARGAIM ERQAVVDAVE SGHIGGYSGD
301: VWDPQPAPKD HPWRYMPNQA MTPHTSGTTI DAQLRYAAGT KDMLERYFKG EDFPTENYIV KDGELAPQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.