Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 2
- mitochondrion 2
- cytosol 2
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43325 | Canola | cytosol | 95.58 | 95.58 |
| Bra010844.1-P | Field mustard | cytosol | 95.27 | 95.27 |
| Bra032295.1-P | Field mustard | cytosol | 95.27 | 95.27 |
| CDY50786 | Canola | cytosol | 94.95 | 94.95 |
| CDX99799 | Canola | cytosol | 94.95 | 94.95 |
| CDX90175 | Canola | cytosol | 94.95 | 94.95 |
| KRH21268 | Soybean | cytosol | 82.02 | 81.76 |
| KRH11018 | Soybean | cytosol | 78.55 | 80.84 |
| PGSC0003DMT400022498 | Potato | cytosol | 80.13 | 80.38 |
| PGSC0003DMT400023242 | Potato | cytosol | 79.5 | 79.75 |
| Solyc03g062940.2.1 | Tomato | cytosol | 79.5 | 79.75 |
| GSMUA_Achr6P14510_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 71.92 | 71.7 |
| VIT_10s0003g01320.t01 | Wine grape | cytosol | 80.13 | 65.13 |
| TraesCS3D01G373900.1 | Wheat | cytosol | 63.72 | 63.72 |
| Os02t0245100-01 | Rice | cytosol, golgi, plastid | 63.72 | 62.73 |
| EES04830 | Sorghum | cytosol, peroxisome, plastid | 63.09 | 62.31 |
| Zm00001d016170_P001 | Maize | cytosol | 61.83 | 61.44 |
| GSMUA_Achr10P... | Banana | mitochondrion | 45.11 | 44.69 |
| HORVU3Hr1G082800.3 | Barley | cytosol, mitochondrion | 39.43 | 38.82 |
| AT2G16780.1 | Thale cress | cytosol | 22.71 | 17.35 |
| AT4G35050.1 | Thale cress | cytosol | 23.03 | 17.22 |
| AT5G58230.1 | Thale cress | nucleus | 21.45 | 16.04 |
| AT4G29730.1 | Thale cress | nucleus | 22.08 | 14.37 |
| AT2G19520.1 | Thale cress | nucleus | 22.4 | 14.0 |
| AT2G19540.1 | Thale cress | cytosol, mitochondrion, nucleus | 19.87 | 13.43 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:23.4.1.1.2 | EntrezGene:839800 | UniProt:A0A178WDC3 | ProteinID:AAF88113.1 | ProteinID:AEE31066.1 |
| EMBL:AF130973 | ArrayExpress:AT1G29260 | EnsemblPlantsGene:AT1G29260 | RefSeq:AT1G29260 | TAIR:AT1G29260 | RefSeq:AT1G29260-TAIR-G |
| EnsemblPlants:AT1G29260.1 | TAIR:AT1G29260.1 | Unigene:At.11271 | EMBL:BT024863 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0080008 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_174220.1 | ProteinID:OAP16388.1 | Symbol:PEX7 | PFAM:PF00400 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22850 | PANTHER:PTHR22850:SF183 | UniProt:Q9XF57 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI000009CC92 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | : | : | : | : | : |
Description
PEX7Peroxisome biogenesis protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF57]
Coordinates
chr1:+:10224815..10226322
Molecular Weight (calculated)
35474.7 Da
IEP (calculated)
5.165
GRAVY (calculated)
-0.156
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVFKAPFNG YSVKFSPFYE SRLAVATAQN FGILGNGRIH VLELAPGAPG VTESVSYDTA DAVYDVCWSE SHDSVLIAAI GDGSVKIYDT ALPPPSNPIR
101: SFQEHAREVQ SVDYNPTRRD SFLTSSWDDT VKLWAMDRPA SVRTFKEHAY CVYQAVWNPK HGDVFASASG DCTLRIWDVR EPGSTMIIPA HDFEILSCDW
201: NKYDDCILAT SSVDKTVKVW DVRSYRVPLA VLNGHGYAVR KVKFSPHRRS LIASCSYDMS VCLWDYMVED ALVGRYDHHT EFAVGIDMSV LVEGLMASTG
301: WDELVYVWQQ GMDPRAS
101: SFQEHAREVQ SVDYNPTRRD SFLTSSWDDT VKLWAMDRPA SVRTFKEHAY CVYQAVWNPK HGDVFASASG DCTLRIWDVR EPGSTMIIPA HDFEILSCDW
201: NKYDDCILAT SSVDKTVKVW DVRSYRVPLA VLNGHGYAVR KVKFSPHRRS LIASCSYDMS VCLWDYMVED ALVGRYDHHT EFAVGIDMSV LVEGLMASTG
301: WDELVYVWQQ GMDPRAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.