Factsheet for AT1G73790.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11089	Canola	cytosol	77.61	81.25
Bra003829.1-P	Field mustard	cytosol	77.61	76.47
CDX68212	Canola	cytosol	77.61	76.47
AT4G09550.2	Thale cress	cytosol	77.61	73.24
Bra015965.1-P	Field mustard	cytosol	73.13	71.01
CDX73014	Canola	cytosol	73.13	71.01
CDY60144	Canola	cytosol	73.13	71.01
VIT_10s0003g05660.t01	Wine grape	cytosol	67.16	61.64
KRH65887	Soybean	cytosol	67.16	61.64
KRH75670	Soybean	cytosol	67.16	60.81
PGSC0003DMT400068084	Potato	cytosol	68.66	60.53
Solyc03g097400.1.1	Tomato	endoplasmic reticulum	49.25	56.9
KRH66740	Soybean	cytosol	34.33	48.94
VIT_08s0040g01030.t01	Wine grape	extracellular	73.13	45.79
TraesCS5B01G500000.1	Wheat	cytosol	58.21	41.94
TraesCS1D01G245500.1	Wheat	cytosol	58.21	41.94
Os03t0435900-01	Rice	cytosol	61.19	41.41
Os11t0368172-01	Rice	cytosol	61.19	41.41
Os03t0824000-01	Rice	cytosol	58.21	41.05
TraesCS1A01G246000.1	Wheat	cytosol	58.21	41.05
TraesCS5D01G500200.1	Wheat	cytosol	58.21	41.05
EER90611	Sorghum	cytosol	58.21	41.05
HORVU5Hr1G114640.1	Barley	cytosol	58.21	40.62
Zm00001d012933_P001	Maize	cytosol	58.21	40.62
Zm00001d034680_P001	Maize	cytosol	58.21	40.62
HORVU5Hr1G114660.1	Barley	peroxisome	56.72	28.36
Os11t0362633-00	Rice	cytosol	40.3	20.61
Os03t0435800-00	Rice	cytosol	40.3	20.61

Protein Annotations

MapMan:13.3.3.1.1	MapMan:20.1.2.2.10	EntrezGene:843714	UniProt:A0A178WM34	ProteinID:AAG52087.1	ProteinID:AEE35509.1
ArrayExpress:AT1G73790	EnsemblPlantsGene:AT1G73790	RefSeq:AT1G73790	TAIR:AT1G73790	RefSeq:AT1G73790-TAIR-G	EnsemblPlants:AT1G73790.1
TAIR:AT1G73790.1	EMBL:AY086832	EMBL:BT002967	EMBL:BT004410	GO:GO:0000923	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005635	GO:GO:0005737	GO:GO:0005815	GO:GO:0005819	GO:GO:0005856	GO:GO:0005874
GO:GO:0007049	GO:GO:0008150	GO:GO:0008274	GO:GO:0009524	GO:GO:0009987	GO:GO:0016043
GO:GO:0031021	GO:GO:0033566	GO:GO:0034080	GO:GO:0034508	GO:GO:0042393	GO:GO:0043015
GO:GO:0051415	GO:GO:0051418	GO:GO:0090307	InterPro:MZT1	RefSeq:NP_565072.1	ProteinID:OAP18172.1
PFAM:PF12554	PO:PO:0000003	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR28520	PANTHER:PTHR28520:SF5	UniProt:Q9C9T3	UniParc:UPI000000BE64

Description

GIP2Mitotic-spindle organizing protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9C9T3]

Coordinates

chr1:+:27744649..27745429

Molecular Weight (calculated)

7359.8 Da

IEP (calculated)

4.301

GRAVY (calculated)

-0.003

Length

67 amino acids

Sequence
(BLAST)

1: MNQEAAETAR ESLELVFRMS NILETGLDRH TLSVLIALCD IGLNPEALAT LVKELRRDSA TTTTTVD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.