Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11089 | Canola | cytosol | 74.65 | 82.81 |
| Bra003829.1-P | Field mustard | cytosol | 74.65 | 77.94 |
| CDX68212 | Canola | cytosol | 74.65 | 77.94 |
| AT1G73790.1 | Thale cress | cytosol | 73.24 | 77.61 |
| KRH75670 | Soybean | cytosol | 76.06 | 72.97 |
| KRH65887 | Soybean | cytosol | 74.65 | 72.6 |
| CDY60144 | Canola | cytosol | 70.42 | 72.46 |
| CDX73014 | Canola | cytosol | 70.42 | 72.46 |
| Bra015965.1-P | Field mustard | cytosol | 70.42 | 72.46 |
| VIT_10s0003g05660.t01 | Wine grape | cytosol | 70.42 | 68.49 |
| PGSC0003DMT400068084 | Potato | cytosol | 71.83 | 67.11 |
| Solyc03g097400.1.1 | Tomato | endoplasmic reticulum | 52.11 | 63.79 |
| KRH66740 | Soybean | cytosol | 36.62 | 55.32 |
| VIT_08s0040g01030.t01 | Wine grape | extracellular | 74.65 | 49.53 |
| TraesCS1A01G246000.1 | Wheat | cytosol | 59.15 | 44.21 |
| TraesCS5B01G500000.1 | Wheat | cytosol | 57.75 | 44.09 |
| TraesCS1D01G245500.1 | Wheat | cytosol | 57.75 | 44.09 |
| TraesCS5D01G500200.1 | Wheat | cytosol | 57.75 | 43.16 |
| HORVU5Hr1G114640.1 | Barley | cytosol | 57.75 | 42.71 |
| Os03t0435900-01 | Rice | cytosol | 59.15 | 42.42 |
| Os11t0368172-01 | Rice | cytosol | 59.15 | 42.42 |
| Os03t0824000-01 | Rice | cytosol | 56.34 | 42.11 |
| EER90611 | Sorghum | cytosol | 56.34 | 42.11 |
| Zm00001d012933_P001 | Maize | cytosol | 56.34 | 41.67 |
| Zm00001d034680_P001 | Maize | cytosol | 54.93 | 40.62 |
| HORVU5Hr1G114660.1 | Barley | peroxisome | 54.93 | 29.1 |
| Os11t0362633-00 | Rice | cytosol | 40.85 | 22.14 |
| Os03t0435800-00 | Rice | cytosol | 40.85 | 22.14 |
Protein Annotations
| MapMan:13.3.3.1.1 | MapMan:20.1.2.2.10 | EntrezGene:826539 | UniProt:A0A178UXG2 | ProteinID:AEE82764.1 | EMBL:AK175417 |
| ProteinID:ANM66685.1 | ArrayExpress:AT4G09550 | EnsemblPlantsGene:AT4G09550 | RefSeq:AT4G09550 | TAIR:AT4G09550 | RefSeq:AT4G09550-TAIR-G |
| EnsemblPlants:AT4G09550.2 | Symbol:ATGIP1 | EMBL:BT010618 | ProteinID:CAB78078.1 | GO:GO:0000226 | GO:GO:0000776 |
| GO:GO:0000923 | GO:GO:0000930 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005640 | GO:GO:0005737 |
| GO:GO:0005815 | GO:GO:0005819 | GO:GO:0005828 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007049 |
| GO:GO:0007052 | GO:GO:0008150 | GO:GO:0008274 | GO:GO:0009524 | GO:GO:0009574 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0031021 | GO:GO:0033566 | GO:GO:0034080 | GO:GO:0034508 |
| GO:GO:0042393 | GO:GO:0043015 | GO:GO:0051415 | GO:GO:0051418 | GO:GO:0072686 | GO:GO:0090307 |
| InterPro:MZT1 | RefSeq:NP_001328567.1 | RefSeq:NP_192693.1 | ProteinID:OAO98629.1 | PFAM:PF12554 | PANTHER:PTHR28520 |
| PANTHER:PTHR28520:SF5 | UniProt:Q9M0N8 | UniParc:UPI00000A6E88 | : | : | : |
Description
GIP1Mitotic-spindle organizing protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M0N8]
Coordinates
chr4:+:6039068..6040215
Molecular Weight (calculated)
7835.4 Da
IEP (calculated)
4.517
GRAVY (calculated)
-0.044
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MDEEASRTAR ESLELVFRMS NILDTGLDRH TLSVLIALCD LGVNPEALAT VVKELRRESI PDSVTTTPSI H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.