Factsheet for AT2G25610.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 3
golgi 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	70.04	91.38
KRH05091	Soybean	golgi, plasma membrane, plastid	70.04	90.34
KRH16027	Soybean	golgi, plasma membrane, plastid	70.04	90.34
VIT_04s0008g04760.t01	Wine grape	endoplasmic reticulum, plasma membrane	69.6	89.27
PGSC0003DMT400073491	Potato	plastid	69.6	89.27
PGSC0003DMT400019560	Potato	plastid	69.6	89.27
VIT_09s0002g05720.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	69.16	88.7
TraesCS3D01G234100.1	Wheat	peroxisome, plasma membrane, plastid	69.16	88.7
TraesCS3B01G249000.1	Wheat	peroxisome, plasma membrane, plastid	69.16	88.7
TraesCS3A01G218100.1	Wheat	peroxisome, plasma membrane, plastid	69.16	88.7
HORVU3Hr1G053400.1	Barley	peroxisome, plasma membrane, plastid	69.16	88.7
Zm00001d044445_P001	Maize	peroxisome, plasma membrane, plastid	68.72	88.64
Zm00001d011321_P002	Maize	peroxisome, plasma membrane, plastid	68.72	88.64
EES01054	Sorghum	peroxisome, plasma membrane, plastid	68.72	88.64
Solyc06g067880.2.1	Tomato	plastid	68.72	88.14
Os01t0610100-01	Rice	peroxisome, plasma membrane, plastid	66.96	86.36
AT4G32530.2	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	75.77	81.9
VIT_18s0086g00420.t01	Wine grape	extracellular, plasma membrane, plastid	21.59	77.78
GSMUA_Achr4P30710_001	Banana	extracellular, plasma membrane, plastid	70.48	72.07
HORVU3Hr1G053390.1	Barley	plastid	70.93	70.31
VIT_07s0141g00500.t01	Wine grape	extracellular	21.59	65.33
GSMUA_Achr7P09940_001	Banana	golgi, plasma membrane	71.81	65.2
VIT_18s0086g00440.t01	Wine grape	plasma membrane	23.79	45.76
VIT_19s0014g04830.t01	Wine grape	plasma membrane	26.43	41.67
AT1G19910.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	23.35	32.12
AT4G38920.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	22.91	31.71
AT4G34720.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	22.91	31.71
AT2G16510.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	22.91	31.71
AT1G75630.2	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	22.91	26.0

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	EntrezGene:817101	UniProt:A0A1P8B2H2	ProteinID:ANM63078.1	ArrayExpress:AT2G25610
EnsemblPlantsGene:AT2G25610	RefSeq:AT2G25610	TAIR:AT2G25610	RefSeq:AT2G25610-TAIR-G	EnsemblPlants:AT2G25610.2	InterPro:ATPase_proteolipid_c-like_dom
InterPro:ATPase_proteolipid_csu	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0016021
GO:GO:0033177	GO:GO:0033179	RefSeq:NP_001325190.1	PFAM:PF00137	PRINTS:PR00122	PANTHER:PTHR10263
PANTHER:PTHR10263:SF18	SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI0008488E89	SEG:seg	:

Description

ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]

Coordinates

chr2:-:10901213..10902919

Molecular Weight (calculated)

24142.7 Da

IEP (calculated)

8.727

GRAVY (calculated)

0.683

Length

227 amino acids

Sequence
(BLAST)

001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.