Factsheet for Zm00001d044445_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011321_P002	Maize	peroxisome, plasma membrane, plastid	100.0	100.0
EES01054	Sorghum	peroxisome, plasma membrane, plastid	98.86	98.86
Os01t0610100-01	Rice	peroxisome, plasma membrane, plastid	97.16	97.16
TraesCS3B01G249000.1	Wheat	peroxisome, plasma membrane, plastid	93.75	93.22
TraesCS3A01G218100.1	Wheat	peroxisome, plasma membrane, plastid	93.75	93.22
HORVU3Hr1G053400.1	Barley	peroxisome, plasma membrane, plastid	93.75	93.22
TraesCS3D01G234100.1	Wheat	peroxisome, plasma membrane, plastid	93.75	93.22
VIT_04s0008g04760.t01	Wine grape	endoplasmic reticulum, plasma membrane	91.48	90.96
KRH05091	Soybean	golgi, plasma membrane, plastid	90.91	90.91
KRH16027	Soybean	golgi, plasma membrane, plastid	90.91	90.91
PGSC0003DMT400073491	Potato	plastid	90.91	90.4
VIT_09s0002g05720.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	90.91	90.4
PGSC0003DMT400019560	Potato	plastid	90.91	90.4
Bra037052.1-P	Field mustard	plasma membrane, vacuole	42.05	90.24
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	89.2	90.23
Solyc06g067880.2.1	Tomato	plastid	89.77	89.27
CDX68854	Canola	endoplasmic reticulum, plasma membrane, vacuole	89.77	89.27
CDY39890	Canola	endoplasmic reticulum, plasma membrane, vacuole	89.2	88.7
CDX75251	Canola	endoplasmic reticulum, plasma membrane, vacuole	89.2	88.7
CDY23329	Canola	endoplasmic reticulum, plasma membrane, vacuole	89.2	88.7
Bra011352.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	88.64	88.14
PGSC0003DMT400065655	Potato	plastid	87.5	86.03
Solyc08g067480.2.1	Tomato	plastid	88.07	83.78
VIT_18s0086g00420.t01	Wine grape	extracellular, plasma membrane, plastid	29.55	82.54
AT4G32530.2	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	88.64	74.29
HORVU3Hr1G053390.1	Barley	plastid	93.75	72.05
GSMUA_Achr4P30710_001	Banana	extracellular, plasma membrane, plastid	88.64	70.27
VIT_07s0141g00500.t01	Wine grape	extracellular	29.55	69.33
AT2G25610.2	Thale cress	plastid	88.64	68.72
GSMUA_Achr7P09940_001	Banana	golgi, plasma membrane	89.77	63.2
CDY13493	Canola	cytosol, plasma membrane, vacuole	58.52	62.42
VIT_18s0086g00440.t01	Wine grape	plasma membrane	30.68	45.76
VIT_19s0014g04830.t01	Wine grape	plasma membrane	32.39	39.58
Zm00001d004821_P002	Maize	extracellular	31.82	33.94
Zm00001d023542_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.82	33.94
Zm00001d053010_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.82	33.94
Zm00001d041882_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.25	31.98
Zm00001d035702_P001	Maize	endoplasmic reticulum, extracellular, vacuole	21.02	26.62
Zm00001d002976_P001	Maize	extracellular, plastid	6.82	12.24

Protein Annotations

Gene3D:1.20.120.610	EntrezGene:100283291	EntrezGene:100285771	MapMan:24.1.1.1.2	ProteinID:AQK96538.1	ProteinID:AQK96539.1
InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	UniProt:B4FZS8	EMBL:BT042616	EMBL:BT069506	EMBL:EU958972
EMBL:EU964163	EMBL:EU973900	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020
GO:GO:0016021	GO:GO:0033177	GO:GO:0033179	ProteinID:ONM41204.1	PFAM:PF00137	PRINTS:PR00122
PANTHER:PTHR10263	PANTHER:PTHR10263:SF18	SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI000160BA5F	EnsemblPlantsGene:Zm00001d044445
EnsemblPlants:Zm00001d044445_P001	EnsemblPlants:Zm00001d044445_T001	SEG:seg	:	:	:

Description

V-type proton ATPase subunit c''2

Coordinates

chr3:+:228253462..228257016

Molecular Weight (calculated)

18069.3 Da

IEP (calculated)

7.900

GRAVY (calculated)

1.036

Length

176 amino acids

Sequence
(BLAST)

001: MSSDSSSWAR ALVQISPYTF SAIGIAVSIG VSVLGAAWGI FITGSSLIGA AIKAPRITSK NLISVIFCEA VAIYGVIVAI ILQTKLESVP TSQMYDPESL
101: RAGYAIFASG LIVGFANLVC GVCVGIIGSS CALSDAQNSS LFVKILVIEI FGSALGLFGV IVGIIMSSQA TWPAKA

Best Arabidopsis Sequence Match ( AT2G25610.2 )
(BLAST)

001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK

Arabidopsis Description

ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.