Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- extracellular 2
- vacuole 2
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 75.68 | 96.55 |
| Bra037052.1-P | Field mustard | plasma membrane, vacuole | 34.23 | 92.68 |
| Solyc06g067880.2.1 | Tomato | plastid | 72.07 | 90.4 |
| VIT_09s0002g05720.t01 | Wine grape | extracellular, mitochondrion, plasma membrane, plastid | 72.07 | 90.4 |
| PGSC0003DMT400065655 | Potato | plastid | 72.52 | 89.94 |
| PGSC0003DMT400073491 | Potato | plastid | 71.17 | 89.27 |
| PGSC0003DMT400019560 | Potato | plastid | 71.17 | 89.27 |
| CDX75251 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.72 | 88.7 |
| CDY23329 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.72 | 88.7 |
| CDY39890 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.72 | 88.7 |
| CDX68854 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.72 | 88.7 |
| VIT_04s0008g04760.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 70.72 | 88.7 |
| Zm00001d011321_P002 | Maize | peroxisome, plasma membrane, plastid | 70.27 | 88.64 |
| Zm00001d044445_P001 | Maize | peroxisome, plasma membrane, plastid | 70.27 | 88.64 |
| Bra011352.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 70.27 | 88.14 |
| KRH05091 | Soybean | golgi, plasma membrane, plastid | 69.82 | 88.07 |
| KRH16027 | Soybean | golgi, plasma membrane, plastid | 69.82 | 88.07 |
| Solyc08g067480.2.1 | Tomato | plastid | 72.97 | 87.57 |
| EES01054 | Sorghum | peroxisome, plasma membrane, plastid | 69.37 | 87.5 |
| Os01t0610100-01 | Rice | peroxisome, plasma membrane, plastid | 68.92 | 86.93 |
| HORVU3Hr1G053400.1 | Barley | peroxisome, plasma membrane, plastid | 68.92 | 86.44 |
| TraesCS3A01G218100.1 | Wheat | peroxisome, plasma membrane, plastid | 68.92 | 86.44 |
| TraesCS3B01G249000.1 | Wheat | peroxisome, plasma membrane, plastid | 68.92 | 86.44 |
| TraesCS3D01G234100.1 | Wheat | peroxisome, plasma membrane, plastid | 68.92 | 86.44 |
| VIT_18s0086g00420.t01 | Wine grape | extracellular, plasma membrane, plastid | 22.52 | 79.37 |
| AT4G32530.2 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 70.72 | 74.76 |
| AT2G25610.2 | Thale cress | plastid | 72.07 | 70.48 |
| GSMUA_Achr7P09940_001 | Banana | golgi, plasma membrane | 77.03 | 68.4 |
| HORVU3Hr1G053390.1 | Barley | plastid | 69.37 | 67.25 |
| VIT_07s0141g00500.t01 | Wine grape | extracellular | 22.52 | 66.67 |
| CDY13493 | Canola | cytosol, plasma membrane, vacuole | 46.85 | 63.03 |
| VIT_18s0086g00440.t01 | Wine grape | plasma membrane | 24.77 | 46.61 |
| VIT_19s0014g04830.t01 | Wine grape | plasma membrane | 27.48 | 42.36 |
| GSMUA_Achr3P19110_001 | Banana | plasma membrane | 3.6 | 15.38 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu | InterPro:F/V-ATP_Csub_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0015078 |
| GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033177 | GO:GO:0033179 | EnsemblPlantsGene:GSMUA_Achr4G30710_001 |
| EnsemblPlants:GSMUA_Achr4P30710_001 | EnsemblPlants:GSMUA_Achr4T30710_001 | UniProt:M0STI3 | PFAM:PF00137 | PRINTS:PR00122 | PANTHER:PTHR10263 |
| PANTHER:PTHR10263:SF18 | SUPFAM:SSF81333 | TMHMM:TMhelix | UniParc:UPI000294B39D | SEG:seg | : |
Description
vacuolar ATP synthase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G30710_001]
Coordinates
chr4:-:28188696..28191076
Molecular Weight (calculated)
23391.9 Da
IEP (calculated)
8.473
GRAVY (calculated)
0.790
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLCKEMLYT TCCFCFRKQE NTQQGSYSPI SCVASHQLRL LYSSLSTAIA SSWSRALTQI SPYTFASVGI AISIGVSVLG AAWGIYITGS SLIGAAIKAP
101: RITSKNLISV IFCEAVAIYG VIVAIILQTK LESVPASKIY DPESLRAGYA IFASGIIVGF ANLMCGLCVG IIGSSCALSD AQNSTLFVKI LVIEIFGSAL
201: GLFGVIVGII MSSQATWPAK TT
101: RITSKNLISV IFCEAVAIYG VIVAIILQTK LESVPASKIY DPESLRAGYA IFASGIIVGF ANLMCGLCVG IIGSSCALSD AQNSTLFVKI LVIEIFGSAL
201: GLFGVIVGII MSSQATWPAK TT
001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK
Arabidopsis Description
ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.