Factsheet for GSMUA_Achr3P19110_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
cytosol 1
endoplasmic reticulum 3
vacuole 3
extracellular 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21044	Sorghum	extracellular	61.54	26.45
Bra012197.1-P	Field mustard	plastid	84.62	23.66
KRH76682	Soybean	nucleus	42.31	13.41
AT1G19910.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.33
TraesCS1A01G019000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.33
Os01t0962300-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.33
KXG23066	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.33
TraesCS1D01G018300.1	Wheat	golgi	42.31	13.33
EES15730	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.33
Bra025781.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.33
Os05t0106100-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	42.31	13.25
Os02t0550100-01	Rice	nucleus	42.31	13.17
TraesCS5B01G117600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
TraesCS5A01G118600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
TraesCS4D01G108200.1	Wheat	golgi	40.38	12.73
TraesCS4B01G110500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
TraesCS4A01G206900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
TraesCS5D01G130000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
Zm00001d004821_P002	Maize	extracellular	40.38	12.73
Zm00001d023542_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
Zm00001d053010_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
Os12t0168900-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
Os11t0169900-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
HORVU4Hr1G019840.1	Barley	vacuole	40.38	12.73
HORVU1Hr1G002500.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
EES09364	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.73
Zm00001d041882_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	40.38	12.21
TraesCS1B01G022800.1	Wheat	endoplasmic reticulum	38.46	12.12
HORVU5Hr1G036250.1	Barley	plastid	40.38	11.6
AT1G75630.2	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	42.31	11.0
CDY54164	Canola	plasma membrane	50.0	6.24
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	15.38	4.6
GSMUA_Achr4P30710_001	Banana	extracellular, plasma membrane, plastid	15.38	3.6
GSMUA_Achr7P09940_001	Banana	golgi, plasma membrane	15.38	3.2
Zm00001d035702_P001	Maize	endoplasmic reticulum, extracellular, vacuole	3.85	1.44
Zm00001d002976_P001	Maize	extracellular, plastid	1.92	1.02
Bra007980.1-P	Field mustard	cytosol	1.92	0.81

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	InterPro:ATPase_proteolipid_c-like_dom	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020
GO:GO:0016021	GO:GO:0033177	EnsemblPlantsGene:GSMUA_Achr3G19110_001	EnsemblPlants:GSMUA_Achr3P19110_001	EnsemblPlants:GSMUA_Achr3T19110_001	UniProt:M0SFX7
PFAM:PF00137	PANTHER:PTHR10263	PANTHER:PTHR10263:SF35	SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI000296718C
SEG:seg	:	:	:	:	:

Description

V-type proton ATPase 16 kDa proteolipid subunit [Source:GMGC_GENE;Acc:GSMUA_Achr3G19110_001]

Coordinates

chr3:+:20503453..20503795

Molecular Weight (calculated)

5733.1 Da

IEP (calculated)

6.584

GRAVY (calculated)

0.775

Length

52 amino acids

Sequence
(BLAST)

1: MDYVYVDFRA NAQQPKLFVG MILILIFAEA LALYGLIVGI ILSSRAGQSR AD

Best Arabidopsis Sequence Match ( AT4G38920.2 )
(BLAST)

001: MGAAYGTAKS GVGVASMGVM RPELVMKSIV PVVMAGVLGI YGLIIAVIIS TGINPKAKSY YLFDGYAHLS SGLACGLAGL SAGMAIGIVG DAGVRANAQQ
101: PKLFVGMILI LIFAEALALY GLIVGIILSS RAGQSRAE

Arabidopsis Description

VHA-c3V-type proton ATPase subunit c1 [Source:UniProtKB/Swiss-Prot;Acc:P0DH92]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.