Factsheet for Bra007980.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035702_P001	Maize	endoplasmic reticulum, extracellular, vacuole	70.73	62.59
KRH76682	Soybean	nucleus	73.17	54.88
AT1G19910.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	73.17	54.55
Bra025781.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	73.17	54.55
KXG23066	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	71.54	53.33
EES15730	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	71.54	53.33
EES09364	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
Os11t0169900-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
Os12t0168900-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
TraesCS1A01G019000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
TraesCS1D01G018300.1	Wheat	golgi	70.73	52.73
TraesCS5A01G118600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
TraesCS5B01G117600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
TraesCS5D01G130000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
Zm00001d004821_P002	Maize	extracellular	70.73	52.73
Zm00001d023542_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
Zm00001d053010_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.73
Os02t0550100-01	Rice	nucleus	71.54	52.69
Os05t0106100-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	70.73	52.41
TraesCS4D01G108200.1	Wheat	golgi	69.92	52.12
HORVU4Hr1G019840.1	Barley	vacuole	69.92	52.12
HORVU1Hr1G002500.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	69.92	52.12
TraesCS1B01G022800.1	Wheat	endoplasmic reticulum	69.92	52.12
TraesCS4B01G110500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	69.92	52.12
TraesCS4A01G206900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	69.92	52.12
Zm00001d041882_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.73	50.58
KXG21044	Sorghum	extracellular	47.15	47.93
HORVU5Hr1G036250.1	Barley	plastid	69.92	47.51
Bra012197.1-P	Field mustard	plastid	71.54	47.31
Os01t0962300-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	60.98	45.45
AT1G75630.2	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	73.17	45.0
Zm00001d002976_P001	Maize	extracellular, plastid	32.52	40.82
Bra023950.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	40.65	40.0
Bra010688.1-P	Field mustard	extracellular	17.07	25.61
CDY54164	Canola	plasma membrane	57.72	17.03
Bra037052.1-P	Field mustard	plasma membrane, vacuole	10.57	15.85
Bra011352.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	21.14	14.69
GSMUA_Achr3P19110_001	Banana	plasma membrane	0.81	1.92

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	InterPro:ATPase_proteolipid_su_C_euk	EnsemblPlantsGene:Bra007980
EnsemblPlants:Bra007980.1	EnsemblPlants:Bra007980.1-P	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0033177	GO:GO:0033179	UniProt:M4CUT5	PFAM:PF00137	PRINTS:PR00122
PANTHER:PTHR10263	PANTHER:PTHR10263:SF21	SUPFAM:SSF81333	TIGRFAMs:TIGR01100	TMHMM:TMhelix	UniParc:UPI0002546E05

Description

AT4G38920 (E=9e-042) AVA-P3, ATVHA-C3 | ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3); ATPase

Coordinates

chrA02:+:12255684..12256252

Molecular Weight (calculated)

12658.7 Da

IEP (calculated)

5.005

GRAVY (calculated)

0.550

Length

123 amino acids

Sequence
(BLAST)

001: MTVAEPGKLN IEEPPPLWGS RSVDCFEKLE QIGEGTYGGV GVASMGVMRP ELVMKSIVPV VMAGVLGIYG LIIAVIISTG INPKAKSYYL FDGYAHLSSG
101: LTCGLAGLSA GMAIGIVGDA GVR

Best Arabidopsis Sequence Match ( AT1G19910.2 )
(BLAST)

001: MASTFSGDET APFFGFLGAA AALVFSCMGA AYGTAKSGVG VASMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIISTGI NPKAKSYYLF DGYAHLSSGL
101: ACGLAGLSAG MAIGIVGDAG VR

Arabidopsis Description

VHA-C2V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:A0A178W2T3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.