Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P19110_001 | Banana | plasma membrane | 23.66 | 84.62 |
| AT1G19910.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 65.05 | 73.33 |
| Bra025781.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 65.05 | 73.33 |
| KRH76682 | Soybean | nucleus | 64.52 | 73.17 |
| KXG21044 | Sorghum | extracellular | 47.31 | 72.73 |
| KXG23066 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 63.98 | 72.12 |
| EES15730 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 63.98 | 72.12 |
| Bra007980.1-P | Field mustard | cytosol | 47.31 | 71.54 |
| Zm00001d053010_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| TraesCS1D01G018300.1 | Wheat | golgi | 63.44 | 71.52 |
| TraesCS1A01G019000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| Os12t0168900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| TraesCS5A01G118600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| EES09364 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| TraesCS5B01G117600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| TraesCS5D01G130000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| Zm00001d004821_P002 | Maize | extracellular | 63.44 | 71.52 |
| Zm00001d023542_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.52 |
| Os05t0106100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 63.44 | 71.08 |
| HORVU4Hr1G019840.1 | Barley | vacuole | 62.9 | 70.91 |
| HORVU1Hr1G002500.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 62.9 | 70.91 |
| TraesCS4D01G108200.1 | Wheat | golgi | 62.9 | 70.91 |
| Os11t0169900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 62.9 | 70.91 |
| TraesCS4B01G110500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 62.9 | 70.91 |
| TraesCS4A01G206900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 62.9 | 70.91 |
| Os02t0550100-01 | Rice | nucleus | 63.44 | 70.66 |
| Zm00001d035702_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 52.69 | 70.5 |
| Zm00001d041882_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 63.98 | 69.19 |
| TraesCS1B01G022800.1 | Wheat | endoplasmic reticulum | 61.29 | 69.09 |
| Os01t0962300-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 54.84 | 61.82 |
| HORVU5Hr1G036250.1 | Barley | plastid | 59.14 | 60.77 |
| AT1G75630.2 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 65.05 | 60.5 |
| Zm00001d002976_P001 | Maize | extracellular, plastid | 27.42 | 52.04 |
| Bra023950.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 32.26 | 48.0 |
| Bra010688.1-P | Field mustard | extracellular | 16.13 | 36.59 |
| Bra037052.1-P | Field mustard | plasma membrane, vacuole | 10.75 | 24.39 |
| Bra011352.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 21.51 | 22.6 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu | InterPro:ATPase_proteolipid_su_C_euk | EnsemblPlantsGene:Bra012197 |
| EnsemblPlants:Bra012197.1 | EnsemblPlants:Bra012197.1-P | InterPro:F/V-ATP_Csub_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0008150 | GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0033177 | GO:GO:0033179 | UniProt:M4D6T7 | PFAM:PF00137 | PRINTS:PR00122 |
| PANTHER:PTHR10263 | PANTHER:PTHR10263:SF13 | SUPFAM:SSF81333 | TIGRFAMs:TIGR01100 | TMHMM:TMhelix | UniParc:UPI0002541612 |
| SEG:seg | : | : | : | : | : |
Description
AT4G38920 (E=7e-053) AVA-P3, ATVHA-C3 | ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3); ATPase
Coordinates
chrA07:-:9350138..9350816
Molecular Weight (calculated)
19193.8 Da
IEP (calculated)
9.886
GRAVY (calculated)
0.673
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLPSSDSS APPPLSFSPV TPNPSFNTSS KLNESTVWVF DLIRFLSGMG AAYGTAKSGV GVASMGVMRP ELVMKSIVPV VMAGVLGIYG LIIAVIISTG
101: VNPKAKSYYL FDGYAHLSSG LAWGLAGLSA GMAIGIVGDA GVRANAQQPK LFVGMILILI FAEALALYGL IVGIILSSRA GQSRAE
101: VNPKAKSYYL FDGYAHLSSG LAWGLAGLSA GMAIGIVGDA GVRANAQQPK LFVGMILILI FAEALALYGL IVGIILSSRA GQSRAE
001: MASTFSGDET APFFGFLGAA AALVFSCMGA AYGTAKSGVG VASMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIISTGI NPKAKSYYLF DGYAHLSSGL
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE
Arabidopsis Description
VHA-C2V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:A0A178W2T3]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.