Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 5
- plastid 1
- endoplasmic reticulum 3
- extracellular 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0272400-00 | |
| Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0168900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 99.39 | 99.39 |
| Zm00001d053010_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 98.79 | 98.79 |
| Zm00001d004821_P002 | Maize | extracellular | 98.79 | 98.79 |
| EES09364 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 98.79 | 98.79 |
| HORVU4Hr1G019840.1 | Barley | vacuole | 98.18 | 98.18 |
| TraesCS4D01G108200.1 | Wheat | golgi | 98.18 | 98.18 |
| TraesCS4B01G110500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 98.18 | 98.18 |
| TraesCS4A01G206900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 98.18 | 98.18 |
| Os05t0106100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 96.97 | 96.39 |
| AT1G19910.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 95.15 | 95.15 |
| AT2G16510.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 94.55 | 95.12 |
| VIT_18s0001g02650.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 94.55 | 95.12 |
| VIT_03s0038g00790.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 94.55 | 95.12 |
| AT4G34720.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 94.55 | 95.12 |
| AT4G38920.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 94.55 | 95.12 |
| Os02t0550100-01 | Rice | nucleus | 95.76 | 94.61 |
| Bra025781.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 94.55 | 94.55 |
| VIT_18s0001g13630.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 93.94 | 94.51 |
| KRH76682 | Soybean | nucleus | 93.94 | 94.51 |
| Solyc04g081090.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 93.94 | 93.94 |
| Os01t0962300-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 84.85 | 84.85 |
| AT1G75630.2 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 95.15 | 78.5 |
| Bra007980.1-P | Field mustard | cytosol | 52.73 | 70.73 |
| VIT_18s0001g15790.t01 | Wine grape | cytosol | 38.79 | 64.65 |
| Bra012197.1-P | Field mustard | plastid | 70.91 | 62.9 |
| Bra023950.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 43.64 | 57.6 |
| CDY13486 | Canola | endoplasmic reticulum, extracellular, vacuole | 43.64 | 57.6 |
| Bra010688.1-P | Field mustard | extracellular | 28.48 | 57.32 |
| CDY09753 | Canola | endoplasmic reticulum, extracellular | 43.03 | 54.2 |
| CDX93877 | Canola | endoplasmic reticulum | 41.82 | 50.37 |
| KRG89360 | Soybean | extracellular | 38.18 | 47.37 |
| GSMUA_Achr3P19110_001 | Banana | plasma membrane | 12.73 | 40.38 |
| CDX99447 | Canola | cytosol, vacuole | 44.85 | 39.57 |
| Os01t0610100-01 | Rice | peroxisome, plasma membrane, plastid | 33.94 | 31.82 |
| CDY54164 | Canola | plasma membrane | 55.76 | 22.06 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | EntrezGene:4349890 | ProteinID:AAX93004.1 | ProteinID:ABA91617.1 | EMBL:AK105044 |
| EMBL:AK121233 | InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu | InterPro:ATPase_proteolipid_su_C_euk | ProteinID:BAF27700.1 | ProteinID:BAT12857.1 |
| ProteinID:EAZ17575.1 | InterPro:F/V-ATP_Csub_sf | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007035 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015078 |
| GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019725 | GO:GO:0033177 |
| GO:GO:0033179 | GO:GO:0046961 | EnsemblPlantsGene:Os11g0169900 | EnsemblPlants:Os11t0169900-01 | PFAM:PF00137 | PRINTS:PR00122 |
| PANTHER:PTHR10263 | PANTHER:PTHR10263:SF14 | UniProt:Q0IUB5 | SUPFAM:SSF81333 | TIGRFAMs:TIGR01100 | TMHMM:TMhelix |
| UniParc:UPI00001381FA | RefSeq:XP_015616865.1 | SEG:seg | : | : | : |
Description
VATP-P1Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment). (Os11t0169900-01);Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment). (Os11t0169900-02)
Coordinates
chr11:-:3378031..3380310
Molecular Weight (calculated)
16667.9 Da
IEP (calculated)
8.679
GRAVY (calculated)
0.970
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVFSGDET APFFGFLGAA SALIFSCMGA AYGTAKSGVG VASMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIISTGI NPKAKPYYLF DGYAHLSSGL
101: ACGLAGLAAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAD
101: ACGLAGLAAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAD
001: MASTFSGDET APFFGFLGAA AALVFSCMGA AYGTAKSGVG VASMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIISTGI NPKAKSYYLF DGYAHLSSGL
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE
Arabidopsis Description
VHA-C2V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:A0A178W2T3]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.