Factsheet for Os01t0962300-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0272400-00
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16510.1	Os10t0114400-01	AT2G01950.1	19000166
AT2G16510.1	Os02t0272400-00	AT4G32750.1	21798944
AT4G34720.1	Os10t0114400-01	AT2G01950.1	19000166
AT4G34720.1	Os02t0272400-00	AT4G32750.1	21798944
AT4G38920.1	Os10t0114400-01	AT2G01950.1	19000166
AT4G38920.1	Os02t0272400-00	AT4G32750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G018300.1	Wheat	golgi	85.45	85.45
TraesCS1A01G019000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	85.45	85.45
Os12t0168900-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	85.45	85.45
Os05t0106100-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	85.45	84.94
AT1G19910.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	84.85	84.85
HORVU1Hr1G002500.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	84.85	84.85
Os11t0169900-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	84.85	84.85
AT2G16510.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	84.24	84.76
AT4G34720.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	84.24	84.76
AT4G38920.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	84.24	84.76
VIT_18s0001g02650.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	84.24	84.76
VIT_03s0038g00790.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	84.24	84.76
VIT_18s0001g13630.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	83.64	84.15
Os02t0550100-01	Rice	nucleus	84.85	83.83
Bra025781.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	83.64	83.64
Solyc04g081090.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	83.03	83.03
KRH76682	Soybean	nucleus	82.42	82.93
TraesCS1B01G022800.1	Wheat	endoplasmic reticulum	82.42	82.42
AT1G75630.2	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	84.24	69.5
Bra007980.1-P	Field mustard	cytosol	45.45	60.98
VIT_18s0001g15790.t01	Wine grape	cytosol	36.36	60.61
CDY13486	Canola	endoplasmic reticulum, extracellular, vacuole	42.42	56.0
Bra023950.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.42	56.0
Bra012197.1-P	Field mustard	plastid	61.82	54.84
CDY09753	Canola	endoplasmic reticulum, extracellular	40.0	50.38
Bra010688.1-P	Field mustard	extracellular	24.85	50.0
CDX93877	Canola	endoplasmic reticulum	39.39	47.45
GSMUA_Achr3P19110_001	Banana	plasma membrane	13.33	42.31
KRG89360	Soybean	extracellular	31.52	39.1
CDX99447	Canola	cytosol, vacuole	41.82	36.9
Os01t0610100-01	Rice	peroxisome, plasma membrane, plastid	31.52	29.55
CDY54164	Canola	plasma membrane	49.7	19.66

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	EntrezGene:4324550	InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	InterPro:ATPase_proteolipid_su_C_euk
ProteinID:BAB63620.1	ProteinID:BAF07391.1	ProteinID:BAS76346.1	ProteinID:EAZ14921.1	InterPro:F/V-ATP_Csub_sf	GO:GO:0000220
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006811	GO:GO:0007035
GO:GO:0008150	GO:GO:0009987	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019725	GO:GO:0033177	GO:GO:0033179	GO:GO:0046961	EnsemblPlantsGene:Os01g0962300
EnsemblPlants:Os01t0962300-00	PFAM:PF00137	PRINTS:PR00122	PANTHER:PTHR10263	PANTHER:PTHR10263:SF35	UniProt:Q94DM9
SUPFAM:SSF81333	TIGRFAMs:TIGR01100	TMHMM:TMhelix	UniParc:UPI000009C76D	RefSeq:XP_015622377.1	SEG:seg

Description

Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment). (Os01t0962300-00)

Coordinates

chr1:+:42417731..42418739

Molecular Weight (calculated)

16753.0 Da

IEP (calculated)

8.232

GRAVY (calculated)

1.021

Length

165 amino acids

Sequence
(BLAST)

001: MSSTFNGDEF APFLGFIGAA LALVFSCMGA AYGTARSGVG VAHMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIITTGI NPTAMPYYHF DGSVHLAAGL
101: ATGLCALAAG LAIGVVGDAG VRANAQQPKL FVGMILILIF AEALGLYGLI VGIILSSRAG QSRAH

Best Arabidopsis Sequence Match ( AT1G19910.1 )
(BLAST)

001: MASTFSGDET APFFGFLGAA AALVFSCMGA AYGTAKSGVG VASMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIISTGI NPKAKSYYLF DGYAHLSSGL
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE

Arabidopsis Description

VHA-C2V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:A0A178W2T3]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.