Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G16510.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 98.79 | 99.39 |
| AT4G34720.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 98.79 | 99.39 |
| AT4G38920.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 98.79 | 99.39 |
| Bra025781.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 98.79 | 98.79 |
| TraesCS1D01G018300.1 | Wheat | golgi | 97.58 | 97.58 |
| TraesCS1A01G019000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 97.58 | 97.58 |
| EES15730 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 96.97 | 96.97 |
| KXG23066 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 96.97 | 96.97 |
| KRH76682 | Soybean | nucleus | 96.36 | 96.95 |
| Zm00001d053010_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 96.36 | 96.36 |
| Zm00001d023542_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 96.36 | 96.36 |
| Zm00001d004821_P002 | Maize | extracellular | 96.36 | 96.36 |
| TraesCS5D01G130000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 96.36 | 96.36 |
| TraesCS5B01G117600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 96.36 | 96.36 |
| TraesCS5A01G118600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 96.36 | 96.36 |
| EES09364 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 96.36 | 96.36 |
| Os02t0550100-01 | Rice | nucleus | 96.97 | 95.81 |
| HORVU4Hr1G019840.1 | Barley | vacuole | 95.76 | 95.76 |
| TraesCS4D01G108200.1 | Wheat | golgi | 95.76 | 95.76 |
| TraesCS4B01G110500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 95.76 | 95.76 |
| TraesCS4A01G206900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 95.76 | 95.76 |
| Os12t0168900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 95.76 | 95.76 |
| HORVU1Hr1G002500.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 95.76 | 95.76 |
| Os05t0106100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 95.76 | 95.18 |
| Os11t0169900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 95.15 | 95.15 |
| TraesCS1B01G022800.1 | Wheat | endoplasmic reticulum | 94.55 | 94.55 |
| Zm00001d041882_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 95.76 | 91.86 |
| Zm00001d035702_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 72.73 | 86.33 |
| Os01t0962300-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 84.85 | 84.85 |
| AT1G75630.2 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 98.18 | 81.0 |
| HORVU5Hr1G036250.1 | Barley | plastid | 84.24 | 76.8 |
| Bra007980.1-P | Field mustard | cytosol | 54.55 | 73.17 |
| Bra012197.1-P | Field mustard | plastid | 73.33 | 65.05 |
| KXG21044 | Sorghum | extracellular | 47.27 | 64.46 |
| Zm00001d002976_P001 | Maize | extracellular, plastid | 35.15 | 59.18 |
| GSMUA_Achr3P19110_001 | Banana | plasma membrane | 13.33 | 42.31 |
| AT4G32530.2 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 32.12 | 25.24 |
| AT2G25610.2 | Thale cress | plastid | 32.12 | 23.35 |
| CDY54164 | Canola | plasma membrane | 58.18 | 23.02 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | EntrezGene:838579 | UniProt:A0A178W2T3 | ProteinID:AAB09472.1 | ProteinID:AAG12542.1 |
| ProteinID:AEE29912.1 | ArrayExpress:AT1G19910 | EnsemblPlantsGene:AT1G19910 | RefSeq:AT1G19910 | TAIR:AT1G19910 | RefSeq:AT1G19910-TAIR-G |
| EnsemblPlants:AT1G19910.1 | TAIR:AT1G19910.1 | InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu | InterPro:ATPase_proteolipid_su_C_euk | Symbol:AVA-P2 |
| EMBL:BT024867 | InterPro:F/V-ATP_Csub_sf | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007035 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015078 |
| GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019725 |
| GO:GO:0033177 | GO:GO:0033179 | GO:GO:0046961 | EMBL:L44582 | EMBL:L44585 | RefSeq:NP_564098.2 |
| ProteinID:OAP12578.1 | UniProt:P59228 | PFAM:PF00137 | PO:PO:0000005 | PO:PO:0000293 | PRINTS:PR00122 |
| PANTHER:PTHR10263 | PANTHER:PTHR10263:SF14 | UniProt:Q24JM2 | SUPFAM:SSF81333 | TIGRFAMs:TIGR01100 | TMHMM:TMhelix |
| UniParc:UPI0000138E63 | SEG:seg | : | : | : | : |
Description
VHA-C2V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:A0A178W2T3]
Coordinates
chr1:+:6913001..6914594
Molecular Weight (calculated)
16643.8 Da
IEP (calculated)
8.679
GRAVY (calculated)
0.959
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTFSGDET APFFGFLGAA AALVFSCMGA AYGTAKSGVG VASMGVMRPE LVMKSIVPVV MAGVLGIYGL IIAVIISTGI NPKAKSYYLF DGYAHLSSGL
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE
101: ACGLAGLSAG MAIGIVGDAG VRANAQQPKL FVGMILILIF AEALALYGLI VGIILSSRAG QSRAE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.