Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P19110_001 | Banana | plasma membrane | 26.45 | 61.54 |
| EES15730 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 65.29 | 47.88 |
| KXG23066 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 65.29 | 47.88 |
| AT2G16510.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.56 |
| AT4G34720.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.56 |
| AT4G38920.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.56 |
| VIT_18s0001g13630.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.56 |
| VIT_18s0001g02650.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.56 |
| VIT_03s0038g00790.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.56 |
| Bra012197.1-P | Field mustard | plastid | 72.73 | 47.31 |
| AT1G19910.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.27 |
| EES09364 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.27 |
| Bra025781.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 47.27 |
| Bra007980.1-P | Field mustard | cytosol | 47.93 | 47.15 |
| Os05t0106100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 46.99 |
| KRH76682 | Soybean | nucleus | 63.64 | 46.95 |
| Os02t0550100-01 | Rice | nucleus | 64.46 | 46.71 |
| Solyc04g081090.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 61.98 | 45.45 |
| Zm00001d035702_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 48.76 | 42.45 |
| AT1G75630.2 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.46 | 39.0 |
| Bra010688.1-P | Field mustard | extracellular | 19.83 | 29.27 |
| VIT_18s0001g15790.t01 | Wine grape | cytosol | 23.14 | 28.28 |
| Zm00001d002976_P001 | Maize | extracellular, plastid | 20.66 | 25.51 |
| CDY13486 | Canola | endoplasmic reticulum, extracellular, vacuole | 23.97 | 23.2 |
| Bra023950.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 23.97 | 23.2 |
| KRG89360 | Soybean | extracellular | 24.79 | 22.56 |
| CDY09753 | Canola | endoplasmic reticulum, extracellular | 23.97 | 22.14 |
| CDY54164 | Canola | plasma membrane | 65.29 | 18.94 |
| CDX93877 | Canola | endoplasmic reticulum | 20.66 | 18.25 |
| EES01054 | Sorghum | peroxisome, plasma membrane, plastid | 23.97 | 16.48 |
| CDX99447 | Canola | cytosol, vacuole | 24.79 | 16.04 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | UniProt:A0A1B6P5V5 | InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu | InterPro:ATPase_proteolipid_su_C_euk |
| InterPro:F/V-ATP_Csub_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033177 |
| GO:GO:0033179 | EnsemblPlants:KXG21044 | ProteinID:KXG21044 | ProteinID:KXG21044.1 | PFAM:PF00137 | PRINTS:PR00122 |
| PANTHER:PTHR10263 | PANTHER:PTHR10263:SF35 | EnsemblPlantsGene:SORBI_3009G006700 | SUPFAM:SSF81333 | TIGRFAMs:TIGR01100 | TMHMM:TMhelix |
| UniParc:UPI00081AB4B3 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:606807..609397
Molecular Weight (calculated)
13238.0 Da
IEP (calculated)
8.963
GRAVY (calculated)
0.979
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVMCLKLVM KSIIPVVMAE VLGICGLIIT IIISTRINPK AKPYYLFDGY VHLSSRLACG LARLTADMAI DIIRDAGVRA NAQQPRLFVG MILILIFAEA
101: LTLYGLIVDI ILSSSCWPIS R
101: LTLYGLIVDI ILSSSCWPIS R
001: MLLGMGAAYG TAKSGVGVAS MGVMRPELVM KSIVPVVMAG VLGIYGLIIA VIISTGINPK AKSYYLFDGY AHLSSGLACG LAGLSAGMAI GIVGDAGVRA
101: NAQQPKLFVG MILILIFAEA LALYGLIVGI ILSSRAGQSR AE
101: NAQQPKLFVG MILILIFAEA LALYGLIVGI ILSSRAGQSR AE
Arabidopsis Description
VHA-c3V-type proton ATPase subunit c1 [Source:UniProtKB/Swiss-Prot;Acc:P0DH92]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.