Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G16510.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 81.0 | 98.78 |
| AT4G34720.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 81.0 | 98.78 |
| AT4G38920.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 81.0 | 98.78 |
| AT1G19910.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 81.0 | 98.18 |
| Bra025781.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 81.0 | 98.18 |
| KRH76682 | Soybean | nucleus | 80.0 | 97.56 |
| EES15730 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 80.0 | 96.97 |
| KXG23066 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 80.0 | 96.97 |
| Zm00001d053010_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 96.36 |
| Zm00001d023542_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 96.36 |
| Zm00001d004821_P002 | Maize | extracellular | 79.5 | 96.36 |
| TraesCS5D01G130000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 96.36 |
| TraesCS5B01G117600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 96.36 |
| TraesCS5A01G118600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 96.36 |
| EES09364 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 96.36 |
| Os05t0106100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 95.78 |
| HORVU4Hr1G019840.1 | Barley | vacuole | 79.0 | 95.76 |
| TraesCS4D01G108200.1 | Wheat | golgi | 79.0 | 95.76 |
| TraesCS4B01G110500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.0 | 95.76 |
| TraesCS4A01G206900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.0 | 95.76 |
| TraesCS1D01G018300.1 | Wheat | golgi | 79.0 | 95.76 |
| TraesCS1A01G019000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.0 | 95.76 |
| Os12t0168900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 79.0 | 95.76 |
| HORVU1Hr1G002500.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 79.0 | 95.76 |
| Os11t0169900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 78.5 | 95.15 |
| Os02t0550100-01 | Rice | nucleus | 79.0 | 94.61 |
| TraesCS1B01G022800.1 | Wheat | endoplasmic reticulum | 76.5 | 92.73 |
| Zm00001d041882_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 79.5 | 92.44 |
| Zm00001d035702_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 60.0 | 86.33 |
| Os01t0962300-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 69.5 | 84.24 |
| HORVU5Hr1G036250.1 | Barley | plastid | 70.0 | 77.35 |
| Bra007980.1-P | Field mustard | cytosol | 45.0 | 73.17 |
| Bra012197.1-P | Field mustard | plastid | 60.5 | 65.05 |
| KXG21044 | Sorghum | extracellular | 39.0 | 64.46 |
| Zm00001d002976_P001 | Maize | extracellular, plastid | 28.5 | 58.16 |
| GSMUA_Achr3P19110_001 | Banana | plasma membrane | 11.0 | 42.31 |
| AT4G32530.2 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 26.0 | 24.76 |
| CDY54164 | Canola | plasma membrane | 48.0 | 23.02 |
| AT2G25610.2 | Thale cress | plastid | 26.0 | 22.91 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | EntrezGene:843898 | ProteinID:AEE35740.1 | ArrayExpress:AT1G75630 | EnsemblPlantsGene:AT1G75630 |
| RefSeq:AT1G75630 | TAIR:AT1G75630 | RefSeq:AT1G75630-TAIR-G | EnsemblPlants:AT1G75630.2 | TAIR:AT1G75630.2 | InterPro:ATPase_proteolipid_c-like_dom |
| InterPro:ATPase_proteolipid_csu | InterPro:ATPase_proteolipid_su_C_euk | Symbol:AVA-P4 | Unigene:At.6076 | InterPro:F/V-ATP_Csub_sf | UniProt:F4HZ57 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033177 |
| GO:GO:0033179 | RefSeq:NP_001185404.1 | PFAM:PF00137 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00122 | PANTHER:PTHR10263 | PANTHER:PTHR10263:SF14 |
| SUPFAM:SSF81333 | TIGRFAMs:TIGR01100 | TMHMM:TMhelix | UniParc:UPI0001E92B08 | SEG:seg | : |
Description
AVA-P4V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:F4HZ57]
Coordinates
chr1:+:28400544..28402355
Molecular Weight (calculated)
20535.5 Da
IEP (calculated)
8.022
GRAVY (calculated)
0.821
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGFSGDE TAPFFGFLGA AAALVFSCMG AAYGTAKSGV GVASMGVMRP ELVMKSIVPV VMAGVLGIYG LIIAVIISTG INPKAKSYYL FDGYAHLSSG
101: LACGLAGLSA GMAIGIVGDA GVRVVDCNPD SKIKIYSFTT SFLSNLSQKE LFIDLLSANA QQPKLFVGMI LILIFAEALA LYGLIVGIIL SSRAGQSRAE
101: LACGLAGLSA GMAIGIVGDA GVRVVDCNPD SKIKIYSFTT SFLSNLSQKE LFIDLLSANA QQPKLFVGMI LILIFAEALA LYGLIVGIIL SSRAGQSRAE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.