Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 2
- plasma membrane 2
- golgi 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037052.1-P | Field mustard | plasma membrane, vacuole | 38.1 | 97.56 |
| CDX75251 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 81.43 | 96.61 |
| CDY23329 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 81.43 | 96.61 |
| CDY39890 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 81.43 | 96.61 |
| Bra011352.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 80.95 | 96.05 |
| CDX68854 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 80.95 | 96.05 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 75.71 | 91.38 |
| KRH05091 | Soybean | golgi, plasma membrane, plastid | 75.71 | 90.34 |
| KRH16027 | Soybean | golgi, plasma membrane, plastid | 75.71 | 90.34 |
| VIT_09s0002g05720.t01 | Wine grape | extracellular, mitochondrion, plasma membrane, plastid | 75.24 | 89.27 |
| VIT_04s0008g04760.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 75.24 | 89.27 |
| PGSC0003DMT400019560 | Potato | plastid | 75.24 | 89.27 |
| PGSC0003DMT400073491 | Potato | plastid | 75.24 | 89.27 |
| HORVU3Hr1G053400.1 | Barley | peroxisome, plasma membrane, plastid | 74.76 | 88.7 |
| TraesCS3A01G218100.1 | Wheat | peroxisome, plasma membrane, plastid | 74.76 | 88.7 |
| TraesCS3B01G249000.1 | Wheat | peroxisome, plasma membrane, plastid | 74.76 | 88.7 |
| TraesCS3D01G234100.1 | Wheat | peroxisome, plasma membrane, plastid | 74.76 | 88.7 |
| Zm00001d011321_P002 | Maize | peroxisome, plasma membrane, plastid | 74.29 | 88.64 |
| Zm00001d044445_P001 | Maize | peroxisome, plasma membrane, plastid | 74.29 | 88.64 |
| EES01054 | Sorghum | peroxisome, plasma membrane, plastid | 74.29 | 88.64 |
| Solyc06g067880.2.1 | Tomato | plastid | 74.29 | 88.14 |
| Os01t0610100-01 | Rice | peroxisome, plasma membrane, plastid | 72.38 | 86.36 |
| VIT_18s0086g00420.t01 | Wine grape | extracellular, plasma membrane, plastid | 23.81 | 79.37 |
| AT2G25610.2 | Thale cress | plastid | 81.9 | 75.77 |
| GSMUA_Achr4P30710_001 | Banana | extracellular, plasma membrane, plastid | 74.76 | 70.72 |
| HORVU3Hr1G053390.1 | Barley | plastid | 75.24 | 69.0 |
| VIT_07s0141g00500.t01 | Wine grape | extracellular | 23.81 | 66.67 |
| CDY13493 | Canola | cytosol, plasma membrane, vacuole | 50.95 | 64.85 |
| GSMUA_Achr7P09940_001 | Banana | golgi, plasma membrane | 75.71 | 63.6 |
| VIT_18s0086g00440.t01 | Wine grape | plasma membrane | 25.71 | 45.76 |
| VIT_19s0014g04830.t01 | Wine grape | plasma membrane | 29.05 | 42.36 |
| AT1G19910.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.24 | 32.12 |
| AT2G16510.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.76 | 31.71 |
| AT4G34720.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.76 | 31.71 |
| AT4G38920.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.76 | 31.71 |
| AT1G75630.2 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.76 | 26.0 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | EntrezGene:829388 | ProteinID:AEE86074.1 | ArrayExpress:AT4G32530 | EnsemblPlantsGene:AT4G32530 |
| RefSeq:AT4G32530 | TAIR:AT4G32530 | RefSeq:AT4G32530-TAIR-G | EnsemblPlants:AT4G32530.2 | TAIR:AT4G32530.2 | InterPro:ATPase_proteolipid_c-like_dom |
| InterPro:ATPase_proteolipid_csu | Unigene:At.3330 | UniProt:B3H4N3 | InterPro:F/V-ATP_Csub_sf | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0008150 | GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0033177 | GO:GO:0033179 | RefSeq:NP_001119099.1 | PFAM:PF00137 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00122 | PANTHER:PTHR10263 | PANTHER:PTHR10263:SF18 | SUPFAM:SSF81333 |
| TMHMM:TMhelix | UniParc:UPI0001739455 | SEG:seg | : | : | : |
Description
ATPase, F0/V0 complex, subunit C protein [Source:UniProtKB/TrEMBL;Acc:B3H4N3]
Coordinates
chr4:-:15693114..15695100
Molecular Weight (calculated)
21762.0 Da
IEP (calculated)
8.281
GRAVY (calculated)
1.053
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGVVALGHA SSWGAALVRI SPYTFSAIGI AISIGVSVLG AAWGIYITGS SLIGAAIEAP RITSKNLISV IFCEAVAIYG VIVAIILQTK LESVPSSKMY
101: DAESLRAGYA IFASGIIVGF ANLVCGSVST LFSFLTVLVF GFHCQICNRG PHFSCRLCVG IIGSSCALSD AQNSTLFVKI LVIEIFGSAL GLFGVIVGII
201: MSAQATWPTK
101: DAESLRAGYA IFASGIIVGF ANLVCGSVST LFSFLTVLVF GFHCQICNRG PHFSCRLCVG IIGSSCALSD AQNSTLFVKI LVIEIFGSAL GLFGVIVGII
201: MSAQATWPTK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.