Factsheet for HORVU3Hr1G053390.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G234100.1	Wheat	peroxisome, plasma membrane, plastid	77.29	100.0
TraesCS3B01G249000.1	Wheat	peroxisome, plasma membrane, plastid	77.29	100.0
TraesCS3A01G218100.1	Wheat	peroxisome, plasma membrane, plastid	77.29	100.0
HORVU3Hr1G053400.1	Barley	peroxisome, plasma membrane, plastid	77.29	100.0
Zm00001d044445_P001	Maize	peroxisome, plasma membrane, plastid	72.05	93.75
Zm00001d011321_P002	Maize	peroxisome, plasma membrane, plastid	72.05	93.75
EES01054	Sorghum	peroxisome, plasma membrane, plastid	72.05	93.75
Os01t0610100-01	Rice	peroxisome, plasma membrane, plastid	71.18	92.61
Bra037052.1-P	Field mustard	plasma membrane, vacuole	32.75	91.46
KRH16027	Soybean	golgi, plasma membrane, plastid	69.43	90.34
KRH05091	Soybean	golgi, plasma membrane, plastid	69.43	90.34
CDX68854	Canola	endoplasmic reticulum, plasma membrane, vacuole	69.0	89.27
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	67.69	89.08
CDY39890	Canola	endoplasmic reticulum, plasma membrane, vacuole	68.56	88.7
CDY23329	Canola	endoplasmic reticulum, plasma membrane, vacuole	68.56	88.7
CDX75251	Canola	endoplasmic reticulum, plasma membrane, vacuole	68.56	88.7
Bra011352.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	68.12	88.14
VIT_04s0008g04760.t01	Wine grape	endoplasmic reticulum, plasma membrane	68.12	88.14
VIT_09s0002g05720.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	67.69	87.57
PGSC0003DMT400019560	Potato	plastid	67.69	87.57
PGSC0003DMT400073491	Potato	plastid	67.69	87.57
Solyc06g067880.2.1	Tomato	plastid	66.81	86.44
PGSC0003DMT400065655	Potato	plastid	66.81	85.47
Solyc08g067480.2.1	Tomato	plastid	67.25	83.24
VIT_18s0086g00420.t01	Wine grape	extracellular, plasma membrane, plastid	21.83	79.37
AT4G32530.2	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	69.0	75.24
AT2G25610.2	Thale cress	plastid	70.31	70.93
GSMUA_Achr4P30710_001	Banana	extracellular, plasma membrane, plastid	67.25	69.37
VIT_07s0141g00500.t01	Wine grape	extracellular	21.83	66.67
GSMUA_Achr7P09940_001	Banana	golgi, plasma membrane	68.56	62.8
CDY13493	Canola	cytosol, plasma membrane, vacuole	44.98	62.42
VIT_18s0086g00440.t01	Wine grape	plasma membrane	23.14	44.92
VIT_19s0014g04830.t01	Wine grape	plasma membrane	24.45	38.89
HORVU4Hr1G019840.1	Barley	vacuole	23.58	32.73
HORVU1Hr1G002500.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	23.58	32.73
HORVU5Hr1G036250.1	Barley	plastid	22.71	28.73

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	UniProt:A0A287L2V8	InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	InterPro:F/V-ATP_Csub_sf
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0016021	GO:GO:0033177	GO:GO:0033179
EnsemblPlantsGene:HORVU3Hr1G053390	EnsemblPlants:HORVU3Hr1G053390.1	PFAM:PF00137	PRINTS:PR00122	PANTHER:PTHR10263	PANTHER:PTHR10263:SF18
SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI000B467AC8	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:393053241..393056947

Molecular Weight (calculated)

24163.4 Da

IEP (calculated)

9.864

GRAVY (calculated)

0.444

Length

229 amino acids

Sequence
(BLAST)

001: WLVPVQTTHT SSPPSHPDSL SFPSHRSNHP KERERKSPIQ HRARTGGDRG GRMSSDYSSS WARALVHISP YTFSAIGIAV SIGVSVLGAA WGIFITGSSL
101: IGAAIKAPRI TSKNLISVIF CEAVAIYGVI VAIILQTKLE SVPTSRMHDP ESMRAGYAIF ASGLIVGFAN LVCGVCVGII GSSCALSDAQ NSTLFVKILV
201: IEIFGSALGL FGVIVGIIMS AQATWPTKV

Best Arabidopsis Sequence Match ( AT2G25610.2 )
(BLAST)

001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK

Arabidopsis Description

ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.