Factsheet for GSMUA_Achr10P27160_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
endoplasmic reticulum 3
vacuole 3
extracellular 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037052.1-P	Field mustard	plasma membrane, vacuole	44.25	93.9
VIT_09s0002g05720.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	93.68	92.09
Solyc06g067880.2.1	Tomato	plastid	92.53	90.96
PGSC0003DMT400073491	Potato	plastid	92.53	90.96
PGSC0003DMT400019560	Potato	plastid	92.53	90.96
PGSC0003DMT400065655	Potato	plastid	93.1	90.5
VIT_04s0008g04760.t01	Wine grape	endoplasmic reticulum, plasma membrane	91.95	90.4
CDX75251	Canola	endoplasmic reticulum, plasma membrane, vacuole	91.38	89.83
CDY23329	Canola	endoplasmic reticulum, plasma membrane, vacuole	91.38	89.83
CDY39890	Canola	endoplasmic reticulum, plasma membrane, vacuole	91.38	89.83
Bra011352.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	90.8	89.27
CDX68854	Canola	endoplasmic reticulum, plasma membrane, vacuole	90.8	89.27
Zm00001d044445_P001	Maize	peroxisome, plasma membrane, plastid	90.23	89.2
EES01054	Sorghum	peroxisome, plasma membrane, plastid	90.23	89.2
Zm00001d011321_P002	Maize	peroxisome, plasma membrane, plastid	90.23	89.2
KRH05091	Soybean	golgi, plasma membrane, plastid	89.66	88.64
KRH16027	Soybean	golgi, plasma membrane, plastid	89.66	88.64
Solyc08g067480.2.1	Tomato	plastid	93.68	88.11
TraesCS3B01G249000.1	Wheat	peroxisome, plasma membrane, plastid	89.08	87.57
HORVU3Hr1G053400.1	Barley	peroxisome, plasma membrane, plastid	89.08	87.57
TraesCS3A01G218100.1	Wheat	peroxisome, plasma membrane, plastid	89.08	87.57
TraesCS3D01G234100.1	Wheat	peroxisome, plasma membrane, plastid	89.08	87.57
Os01t0610100-01	Rice	peroxisome, plasma membrane, plastid	88.51	87.5
VIT_18s0086g00420.t01	Wine grape	extracellular, plasma membrane, plastid	29.89	82.54
AT4G32530.2	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	91.38	75.71
GSMUA_Achr4P30710_001	Banana	extracellular, plasma membrane, plastid	96.55	75.68
AT2G25610.2	Thale cress	plastid	91.38	70.04
VIT_07s0141g00500.t01	Wine grape	extracellular	29.89	69.33
GSMUA_Achr7P09940_001	Banana	golgi, plasma membrane	99.43	69.2
HORVU3Hr1G053390.1	Barley	plastid	89.08	67.69
CDY13493	Canola	cytosol, plasma membrane, vacuole	60.92	64.24
VIT_18s0086g00440.t01	Wine grape	plasma membrane	31.03	45.76
VIT_19s0014g04830.t01	Wine grape	plasma membrane	33.33	40.28
GSMUA_Achr3P19110_001	Banana	plasma membrane	4.6	15.38

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078
GO:GO:0015991	GO:GO:0016020	GO:GO:0016021	GO:GO:0033177	GO:GO:0033179	EnsemblPlantsGene:GSMUA_Achr10G27160_001
EnsemblPlants:GSMUA_Achr10P27160_001	EnsemblPlants:GSMUA_Achr10T27160_001	UniProt:M0RLU0	PFAM:PF00137	PRINTS:PR00122	PANTHER:PTHR10263
PANTHER:PTHR10263:SF18	SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI000296A74D	SEG:seg	:

Description

Putative V-type proton ATPase 21 kDa proteolipid subunit [Source:GMGC_GENE;Acc:GSMUA_Achr10G27160_001]

Coordinates

chr10:-:30389085..30393167

Molecular Weight (calculated)

17941.3 Da

IEP (calculated)

8.624

GRAVY (calculated)

1.025

Length

174 amino acids

Sequence
(BLAST)

001: MSSSWSRALT QISPYTFASI GIAISIGVSV LGAAWGIYIT GSSLIGAAIK APRITSKNLI SVIFCEAVAI YGVIVAIILQ TKLESVPSSK IYDPESLRAG
101: YAIFASGIIV GFANLMCGLC VGIIGSSCAL SDAQNSTLFV KILVIEIFGS ALGLFGVIVG IIMSAQATWP AKTA

Best Arabidopsis Sequence Match ( AT2G25610.2 )
(BLAST)

001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK

Arabidopsis Description

ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.