Factsheet for Bra037052.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13493	Canola	cytosol, plasma membrane, vacuole	91.46	45.45
Bra011352.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	96.34	44.63
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	93.9	44.25
KRH05091	Soybean	golgi, plasma membrane, plastid	92.68	43.18
KRH16027	Soybean	golgi, plasma membrane, plastid	92.68	43.18
VIT_09s0002g05720.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	91.46	42.37
VIT_04s0008g04760.t01	Wine grape	endoplasmic reticulum, plasma membrane	91.46	42.37
TraesCS3D01G234100.1	Wheat	peroxisome, plasma membrane, plastid	91.46	42.37
TraesCS3B01G249000.1	Wheat	peroxisome, plasma membrane, plastid	91.46	42.37
TraesCS3A01G218100.1	Wheat	peroxisome, plasma membrane, plastid	91.46	42.37
Solyc06g067880.2.1	Tomato	plastid	91.46	42.37
PGSC0003DMT400073491	Potato	plastid	91.46	42.37
PGSC0003DMT400019560	Potato	plastid	91.46	42.37
HORVU3Hr1G053400.1	Barley	peroxisome, plasma membrane, plastid	91.46	42.37
Zm00001d044445_P001	Maize	peroxisome, plasma membrane, plastid	90.24	42.05
Zm00001d011321_P002	Maize	peroxisome, plasma membrane, plastid	90.24	42.05
EES01054	Sorghum	peroxisome, plasma membrane, plastid	90.24	42.05
Os01t0610100-01	Rice	peroxisome, plasma membrane, plastid	87.8	40.91
AT4G32530.2	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	97.56	38.1
GSMUA_Achr4P30710_001	Banana	extracellular, plasma membrane, plastid	92.68	34.23
HORVU3Hr1G053390.1	Barley	plastid	91.46	32.75
GSMUA_Achr7P09940_001	Banana	golgi, plasma membrane	92.68	30.4
Bra010688.1-P	Field mustard	extracellular	25.61	25.61
VIT_18s0086g00440.t01	Wine grape	plasma membrane	35.37	24.58
Bra025781.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	37.8	18.79
VIT_19s0014g04830.t01	Wine grape	plasma membrane	32.93	18.75
Bra012197.1-P	Field mustard	plastid	24.39	10.75
Bra007980.1-P	Field mustard	cytosol	15.85	10.57
Bra023950.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	7.32	4.8
VIT_07s0141g00500.t01	Wine grape	extracellular	0.0	0.0
VIT_18s0086g00420.t01	Wine grape	extracellular, plasma membrane, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	EnsemblPlantsGene:Bra037052	EnsemblPlants:Bra037052.1
EnsemblPlants:Bra037052.1-P	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0016021
GO:GO:0033177	GO:GO:0033179	UniProt:M4F7J1	PFAM:PF00137	PRINTS:PR00122	PANTHER:PTHR10263
PANTHER:PTHR10263:SF18	SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI0002540FFC	:	:

Description

AT2G25610 (E=2e-040) | H+-transporting two-sector ATPase, C subunit family protein

Coordinates

chrA03:-:28679357..28679678

Molecular Weight (calculated)

8412.5 Da

IEP (calculated)

4.544

GRAVY (calculated)

1.167

Length

82 amino acids

Sequence
(BLAST)

1: MYDAESLRAG YAIFASGIIV GFANLVCGLC VGIIGSSCAL SDAQNSTLLV KILVIEIFGS ALGLFGVIVG IIMSAQATWP TK

Best Arabidopsis Sequence Match ( AT2G25610.2 )
(BLAST)

001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK

Arabidopsis Description

ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.