Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037052.1-P | Field mustard | plasma membrane, vacuole | 45.45 | 91.46 |
| CDX68854 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 65.45 | 61.02 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 64.24 | 60.92 |
| CDX75251 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 64.85 | 60.45 |
| CDY23329 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 64.85 | 60.45 |
| CDY39890 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 64.85 | 60.45 |
| VIT_09s0002g05720.t01 | Wine grape | extracellular, mitochondrion, plasma membrane, plastid | 63.03 | 58.76 |
| Zm00001d044445_P001 | Maize | peroxisome, plasma membrane, plastid | 62.42 | 58.52 |
| Zm00001d011321_P002 | Maize | peroxisome, plasma membrane, plastid | 62.42 | 58.52 |
| KRH16027 | Soybean | golgi, plasma membrane, plastid | 62.42 | 58.52 |
| KRH05091 | Soybean | golgi, plasma membrane, plastid | 62.42 | 58.52 |
| EES01054 | Sorghum | peroxisome, plasma membrane, plastid | 62.42 | 58.52 |
| VIT_04s0008g04760.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 62.42 | 58.19 |
| TraesCS3D01G234100.1 | Wheat | peroxisome, plasma membrane, plastid | 62.42 | 58.19 |
| TraesCS3B01G249000.1 | Wheat | peroxisome, plasma membrane, plastid | 62.42 | 58.19 |
| HORVU3Hr1G053400.1 | Barley | peroxisome, plasma membrane, plastid | 62.42 | 58.19 |
| TraesCS3A01G218100.1 | Wheat | peroxisome, plasma membrane, plastid | 62.42 | 58.19 |
| Solyc06g067880.2.1 | Tomato | plastid | 62.42 | 58.19 |
| PGSC0003DMT400019560 | Potato | plastid | 62.42 | 58.19 |
| PGSC0003DMT400073491 | Potato | plastid | 62.42 | 58.19 |
| Os01t0610100-01 | Rice | peroxisome, plasma membrane, plastid | 60.0 | 56.25 |
| AT4G32530.2 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 64.85 | 50.95 |
| GSMUA_Achr4P30710_001 | Banana | extracellular, plasma membrane, plastid | 63.03 | 46.85 |
| HORVU3Hr1G053390.1 | Barley | plastid | 62.42 | 44.98 |
| VIT_18s0086g00440.t01 | Wine grape | plasma membrane | 30.3 | 42.37 |
| GSMUA_Achr7P09940_001 | Banana | golgi, plasma membrane | 63.64 | 42.0 |
| VIT_19s0014g04830.t01 | Wine grape | plasma membrane | 29.09 | 33.33 |
| CDY13486 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.91 | 14.4 |
| VIT_18s0086g00420.t01 | Wine grape | extracellular, plasma membrane, plastid | 4.85 | 12.7 |
| CDX99447 | Canola | cytosol, vacuole | 12.12 | 10.7 |
| VIT_07s0141g00500.t01 | Wine grape | extracellular | 4.85 | 10.67 |
| CDX93877 | Canola | endoplasmic reticulum | 7.88 | 9.49 |
| CDY09753 | Canola | endoplasmic reticulum, extracellular | 6.67 | 8.4 |
| CDY54164 | Canola | plasma membrane | 18.79 | 7.43 |
Protein Annotations
| Gene3D:1.20.120.610 | MapMan:24.1.1.1.2 | GO:A0A078FMD1 | UniProt:A0A078FMD1 | InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu |
| EnsemblPlants:CDY13493 | ProteinID:CDY13493 | ProteinID:CDY13493.1 | InterPro:F/V-ATP_Csub_sf | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0015078 | GO:GO:0015991 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033177 | GO:GO:0033179 | EnsemblPlantsGene:GSBRNA2T00077800001 | PFAM:PF00137 |
| PRINTS:PR00122 | PANTHER:PTHR10263 | PANTHER:PTHR10263:SF18 | SUPFAM:SSF81333 | TMHMM:TMhelix | UniParc:UPI0004EE13A0 |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g52110DBnaA03g52110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMD1]
Coordinates
chrLK032035:-:658462..662314
Molecular Weight (calculated)
17682.9 Da
IEP (calculated)
6.949
GRAVY (calculated)
0.961
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRASHPLSE NYCTAESIIN GIIMFCNLIG CYYRALSSNF CFVCSFFVFS CPNVIFCEAV AIYGVIVAII RQTKLESVPT SKMYDAESLR AGYAIFASGI
101: IVGLPTLYAG LLCVGIIGSS CALSDAQNST LFVKILVIEI FGSALGLFGV IVGIIMSAQA TWPTK
101: IVGLPTLYAG LLCVGIIGSS CALSDAQNST LFVKILVIEI FGSALGLFGV IVGIIMSAQA TWPTK
001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK
Arabidopsis Description
ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.