Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 3
- mitochondrion 1
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16027 | Soybean | golgi, plasma membrane, plastid | 100.0 | 100.0 |
| VIT_09s0002g05720.t01 | Wine grape | extracellular, mitochondrion, plasma membrane, plastid | 94.32 | 93.79 |
| Bra037052.1-P | Field mustard | plasma membrane, vacuole | 43.18 | 92.68 |
| VIT_04s0008g04760.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 93.18 | 92.66 |
| PGSC0003DMT400073491 | Potato | plastid | 93.18 | 92.66 |
| PGSC0003DMT400019560 | Potato | plastid | 93.18 | 92.66 |
| EES01054 | Sorghum | peroxisome, plasma membrane, plastid | 92.05 | 92.05 |
| Solyc06g067880.2.1 | Tomato | plastid | 92.05 | 91.53 |
| Zm00001d044445_P001 | Maize | peroxisome, plasma membrane, plastid | 90.91 | 90.91 |
| Zm00001d011321_P002 | Maize | peroxisome, plasma membrane, plastid | 90.91 | 90.91 |
| HORVU3Hr1G053400.1 | Barley | peroxisome, plasma membrane, plastid | 90.34 | 89.83 |
| TraesCS3A01G218100.1 | Wheat | peroxisome, plasma membrane, plastid | 90.34 | 89.83 |
| TraesCS3B01G249000.1 | Wheat | peroxisome, plasma membrane, plastid | 90.34 | 89.83 |
| TraesCS3D01G234100.1 | Wheat | peroxisome, plasma membrane, plastid | 90.34 | 89.83 |
| Os01t0610100-01 | Rice | peroxisome, plasma membrane, plastid | 89.77 | 89.77 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 88.64 | 89.66 |
| CDY39890 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 89.77 | 89.27 |
| CDY23329 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 89.77 | 89.27 |
| CDX68854 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 89.77 | 89.27 |
| CDX75251 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 89.77 | 89.27 |
| Bra011352.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 89.2 | 88.7 |
| VIT_18s0086g00420.t01 | Wine grape | extracellular, plasma membrane, plastid | 29.55 | 82.54 |
| AT4G32530.2 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 90.34 | 75.71 |
| VIT_07s0141g00500.t01 | Wine grape | extracellular | 30.11 | 70.67 |
| AT2G25610.2 | Thale cress | plastid | 90.34 | 70.04 |
| GSMUA_Achr4P30710_001 | Banana | extracellular, plasma membrane, plastid | 88.07 | 69.82 |
| HORVU3Hr1G053390.1 | Barley | plastid | 90.34 | 69.43 |
| GSMUA_Achr7P09940_001 | Banana | golgi, plasma membrane | 90.34 | 63.6 |
| CDY13493 | Canola | cytosol, plasma membrane, vacuole | 58.52 | 62.42 |
| VIT_18s0086g00440.t01 | Wine grape | plasma membrane | 33.52 | 50.0 |
| VIT_19s0014g04830.t01 | Wine grape | plasma membrane | 35.8 | 43.75 |
| KRH76682 | Soybean | nucleus | 30.11 | 32.32 |
| KRG89360 | Soybean | extracellular | 14.2 | 18.8 |
Protein Annotations
| Gene3D:1.20.120.610 | EntrezGene:100527177 | EntrezGene:100778175 | MapMan:24.1.1.1.2 | EMBL:ACUP02008755 | EMBL:ACUP02010673 |
| InterPro:ATPase_proteolipid_c-like_dom | InterPro:ATPase_proteolipid_csu | EMBL:BT091999 | UniProt:C6T3I8 | InterPro:F/V-ATP_Csub_sf | EnsemblPlantsGene:GLYMA_17G206600 |
| GO:GO:0000220 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007035 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019725 | GO:GO:0033177 | GO:GO:0033179 | GO:GO:0046961 | EnsemblPlants:KRH05091 |
| ProteinID:KRH05091 | ProteinID:KRH05091.1 | ProteinID:KRH16027.1 | PFAM:PF00137 | PRINTS:PR00122 | PANTHER:PTHR10263 |
| PANTHER:PTHR10263:SF18 | SUPFAM:SSF81333 | TMHMM:TMhelix | UniParc:UPI0001B15486 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:+:33867799..33870789
Molecular Weight (calculated)
17994.4 Da
IEP (calculated)
8.631
GRAVY (calculated)
1.158
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAHSSSWGR ALVAISPYTF SAIGIAVAIG VSVLGAAWGI YITGSSLIGA AIRAPRITSK NLISVIFCEA VAIYGVIVAI ILQTKLESVP ASNIYAPESL
101: RAGYAIFASG LIVGFANLVC GLCVGIIGSS CALSDAQNSS LFVKILVIEI FGSALGLFGV IVGIIMSAQA TWPTKV
101: RAGYAIFASG LIVGFANLVC GLCVGIIGSS CALSDAQNSS LFVKILVIEI FGSALGLFGV IVGIIMSAQA TWPTKV
001: MVIEFTRIHQ RVIWSCSISD RTGSVNHLLL RKTEKETNQI HSYQRDREKM SGVAIHASSW GAALVRISPY TFSAIGIAIS IGVSVLGAAW GIYITGSSLI
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK
101: GAAIEAPRIT SKNLISVIFC EAVAIYGVIV AIILQTKLES VPSSKMYDAE SLRAGYAIFA SGIIVGFANL VCGLCVGIIG SSCALSDAQN STLFVKILVI
201: EIFGSALGLF GVIVGIIMSA QATWPTK
Arabidopsis Description
ATPase, F0/V0 complex, subunit C protein [Source:TAIR;Acc:AT2G25610]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.