Factsheet for HORVU5Hr1G036250.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, plastid
ChloroP:	plastid
MultiLoc:	golgi
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1
HORVU6Hr1G051240.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16510.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166
AT2G16510.1	HORVU6Hr1G051240.4	AT4G32750.1	21798944
AT4G34720.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166
AT4G34720.1	HORVU6Hr1G051240.4	AT4G32750.1	21798944
AT4G38920.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166
AT4G38920.1	HORVU6Hr1G051240.4	AT4G32750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15730	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	79.01	86.67
KXG23066	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	79.01	86.67
Zm00001d023542_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	78.45	86.06
TraesCS5D01G130000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	78.45	86.06
TraesCS5B01G117600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	78.45	86.06
TraesCS5A01G118600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	78.45	86.06
HORVU1Hr1G002500.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	77.9	85.45
HORVU4Hr1G019840.1	Barley	vacuole	77.9	85.45
AT2G16510.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.76
AT4G34720.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.76
AT4G38920.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.76
VIT_18s0001g02650.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.76
VIT_03s0038g00790.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.76
Bra025781.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.24
AT1G19910.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	76.8	84.24
KRH76682	Soybean	nucleus	76.24	84.15
VIT_18s0001g13630.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	76.24	84.15
Zm00001d041882_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	78.45	82.56
Solyc04g081090.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	75.14	82.42
AT1G75630.2	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	77.35	70.0
Bra007980.1-P	Field mustard	cytosol	47.51	69.92
Bra012197.1-P	Field mustard	plastid	60.77	59.14
Bra010688.1-P	Field mustard	extracellular	25.97	57.32
VIT_18s0001g15790.t01	Wine grape	cytosol	27.07	49.49
CDY13486	Canola	endoplasmic reticulum, extracellular, vacuole	33.15	48.0
Bra023950.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	33.15	48.0
CDY09753	Canola	endoplasmic reticulum, extracellular	32.6	45.04
KRG89360	Soybean	extracellular	30.94	42.11
GSMUA_Achr3P19110_001	Banana	plasma membrane	11.6	40.38
CDX93877	Canola	endoplasmic reticulum	29.28	38.69
CDX99447	Canola	cytosol, vacuole	32.6	31.55
HORVU3Hr1G053400.1	Barley	peroxisome, plasma membrane, plastid	28.18	28.81
HORVU3Hr1G053390.1	Barley	plastid	28.73	22.71
CDY54164	Canola	plasma membrane	50.83	22.06

Protein Annotations

Gene3D:1.20.120.610	MapMan:24.1.1.1.2	UniProt:A0A287QVG7	InterPro:ATPase_proteolipid_c-like_dom	InterPro:ATPase_proteolipid_csu	InterPro:ATPase_proteolipid_su_C_euk
InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0016021	GO:GO:0033177	GO:GO:0033179
EnsemblPlantsGene:HORVU5Hr1G036250	EnsemblPlants:HORVU5Hr1G036250.1	PFAM:PF00137	PRINTS:PR00122	PANTHER:PTHR10263	PANTHER:PTHR10263:SF13
SUPFAM:SSF81333	TIGRFAMs:TIGR01100	TMHMM:TMhelix	UniParc:UPI000B477137	SEG:seg	:

Description

V-type proton ATPase proteolipid subunit [Source:UniProtKB/TrEMBL;Acc:A0A287QVG7]

Coordinates

chrchr5H:-:255509706..255511831

Molecular Weight (calculated)

18411.9 Da

IEP (calculated)

10.544

GRAVY (calculated)

0.474

Length

181 amino acids

Sequence
(BLAST)

001: LRSDRGSPDQ IPKRQKESSS SPLGGRASRP PIAAAAAGGR CRRCSAAYGT AKSGVGVASM GVMRPELVMK SIVPVVMAGV LGIYGLIIAV IISTGINPKA
101: KPYYLFDGYA HLSSGLACGL AGLAAGMAIG IVGDAGVRAN AQQPKLFVGM ILILIFAEAL ALYGLIVGII LSSRAGQSRA D

Best Arabidopsis Sequence Match ( AT2G16510.1 )
(BLAST)

001: MSTFSGDETA PFFGFLGAAA ALVFSCMGAA YGTAKSGVGV ASMGVMRPEL VMKSIVPVVM AGVLGIYGLI IAVIISTGIN PKAKSYYLFD GYAHLSSGLA
101: CGLAGLSAGM AIGIVGDAGV RANAQQPKLF VGMILILIFA EALALYGLIV GIILSSRAGQ SRAE

Arabidopsis Description

VHA-c3V-type proton ATPase subunit c1 [Source:UniProtKB/Swiss-Prot;Acc:P0DH92]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.