Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06945 | Canola | plastid | 80.84 | 80.84 |
| Bra016952.1-P | Field mustard | plastid | 79.31 | 79.62 |
| CDY57582 | Canola | plastid | 76.63 | 78.12 |
| KRH66631 | Soybean | cytosol | 22.22 | 52.73 |
| PGSC0003DMT400050859 | Potato | plastid | 48.28 | 49.41 |
| Solyc03g044630.1.1 | Tomato | plastid | 47.51 | 49.01 |
| VIT_08s0040g00160.t01 | Wine grape | plastid | 45.98 | 48.0 |
| KRG94998 | Soybean | plastid | 45.59 | 47.98 |
| TraesCS4B01G128100.1 | Wheat | plastid | 41.0 | 42.29 |
| TraesCSU01G261400.1 | Wheat | plastid | 40.61 | 41.9 |
| TraesCS4D01G124600.1 | Wheat | plastid | 40.61 | 41.73 |
| HORVU4Hr1G026810.1 | Barley | plastid | 40.23 | 39.77 |
| Os11t0130200-01 | Rice | plastid | 41.76 | 39.64 |
| KXG27654 | Sorghum | plastid | 43.68 | 39.31 |
| HORVU4Hr1G026800.1 | Barley | cytosol | 39.85 | 38.24 |
| Zm00001d052409_P001 | Maize | plastid | 42.91 | 33.84 |
| KRH66630 | Soybean | plastid | 19.54 | 32.48 |
Protein Annotations
| Gene3D:1.20.58.500 | MapMan:35.2 | EntrezGene:818711 | UniProt:A0A178VWN8 | ProteinID:AAD11999.1 | ProteinID:AEC09934.1 |
| ArrayExpress:AT2G41120 | EnsemblPlantsGene:AT2G41120 | RefSeq:AT2G41120 | TAIR:AT2G41120 | RefSeq:AT2G41120-TAIR-G | EnsemblPlants:AT2G41120.1 |
| TAIR:AT2G41120.1 | Unigene:At.69620 | EMBL:BT010759 | EMBL:BT010981 | InterPro:DUF309 | GO:GO:0008150 |
| RefSeq:NP_181645.1 | UniProt:O80675 | ProteinID:OAP10747.1 | PFAM:PF03745 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR34796 | SUPFAM:SSF140663 |
| InterPro:TTHA0068_sf | UniParc:UPI00000A5546 | SEG:seg | : | : | : |
Description
At2g41120 [Source:UniProtKB/TrEMBL;Acc:O80675]
Coordinates
chr2:-:17141275..17142485
Molecular Weight (calculated)
29533.4 Da
IEP (calculated)
4.756
GRAVY (calculated)
-0.377
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSSKHFQV PSSFTLPPSS FFSSLIPSSP ISVTASTIRA STKFSSIRVR FSRRSIVRYN DHAGEDEEDS DEDKEEYWSF EEAVTLFNKR DYYKSHDALE
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.