CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052409_P001	Maize	plastid	73.1	64.05
TraesCSU01G261400.1	Wheat	plastid	55.86	64.03
TraesCS4B01G128100.1	Wheat	plastid	55.17	63.24
TraesCS4D01G124600.1	Wheat	plastid	55.17	62.99
HORVU4Hr1G026810.1	Barley	plastid	56.55	62.12
Os11t0130200-01	Rice	plastid	57.59	60.73
HORVU4Hr1G026800.1	Barley	cytosol	55.52	59.19
KRH66631	Soybean	cytosol	18.97	50.0
KRG94998	Soybean	plastid	39.66	46.37
VIT_08s0040g00160.t01	Wine grape	plastid	38.62	44.8
Bra016952.1-P	Field mustard	plastid	39.31	43.85
AT2G41120.1	Thale cress	plastid	39.31	43.68
CDY06945	Canola	plastid	39.31	43.68
CDY57582	Canola	plastid	37.93	42.97
Solyc03g044630.1.1	Tomato	plastid	36.9	42.29
PGSC0003DMT400050859	Potato	plastid	36.55	41.57
KRH66630	Soybean	plastid	16.21	29.94

Protein Annotations

EnsemblPlants:KXG27654	EnsemblPlantsGene:SORBI_3005G021600	Gene3D:1.10.3450.10	InterPro:DUF309	InterPro:TTHA0068_sf	PANTHER:PTHR34796
PFAM:PF03745	ProteinID:KXG27654	ProteinID:KXG27654.1	SEG:seg	SUPFAM:SSF140663	UniParc:UPI0002207275
UniProt:A0A1B6PPR0	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1987753..1989358

Molecular Weight (calculated)

31233.7 Da

IEP (calculated)

6.499

GRAVY (calculated)

-0.408

Length

290 amino acids

Sequence
(BLAST)

001: MAVPASASAC VRAGPPPSRR ACTSTTGGTG TAAFSLICRK RLPPPTRQPI HLQLQGRASS DLRCRRRLLT ARGERPAPDE DEEEAAGAGG GSFDAAVALF
101: NRGEYHACHD VVEELWYGAE DPARTLLHGV LQCAVGFHHL FNQNHRGAMM ELGEGLCKLR KLQLDSDGDS GGGGPFSRFR DEVAAVLQFL YRTQKELAAC
201: TDEMCLTMDG SASSYQLLGN FAAGQQLYRL ELEAEEDGAC SSILFSAPNN NKGDGASQGA QAHHPQRVKL PTLRATEQHL AALQCTYEYT

Best Arabidopsis Sequence Match ( AT2G41120.1 )
(BLAST)

001: MAVSSKHFQV PSSFTLPPSS FFSSLIPSSP ISVTASTIRA STKFSSIRVR FSRRSIVRYN DHAGEDEEDS DEDKEEYWSF EEAVTLFNKR DYYKSHDALE
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F

Arabidopsis Description

At2g41120 [Source:UniProtKB/TrEMBL;Acc:O80675]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.