Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66631 | Soybean | cytosol | 25.6 | 58.18 |
| KRG94998 | Soybean | plastid | 52.4 | 52.82 |
| Bra016952.1-P | Field mustard | plastid | 49.2 | 47.31 |
| PGSC0003DMT400050859 | Potato | plastid | 47.6 | 46.67 |
| CDY57582 | Canola | plastid | 47.6 | 46.48 |
| CDY06945 | Canola | plastid | 48.0 | 45.98 |
| AT2G41120.1 | Thale cress | plastid | 48.0 | 45.98 |
| Solyc03g044630.1.1 | Tomato | plastid | 46.0 | 45.45 |
| TraesCS4B01G128100.1 | Wheat | plastid | 44.0 | 43.48 |
| TraesCSU01G261400.1 | Wheat | plastid | 43.6 | 43.08 |
| TraesCS4D01G124600.1 | Wheat | plastid | 43.6 | 42.91 |
| HORVU4Hr1G026810.1 | Barley | plastid | 43.6 | 41.29 |
| Os11t0130200-01 | Rice | plastid | 44.8 | 40.73 |
| KXG27654 | Sorghum | plastid | 44.8 | 38.62 |
| HORVU4Hr1G026800.1 | Barley | cytosol | 41.2 | 37.87 |
| Zm00001d052409_P001 | Maize | plastid | 44.8 | 33.84 |
| KRH66630 | Soybean | plastid | 20.4 | 32.48 |
Protein Annotations
| Gene3D:1.20.58.500 | EntrezGene:100267181 | wikigene:100267181 | MapMan:35.2 | EMBL:AM477006 | ProteinID:CAN70760 |
| ProteinID:CAN70760.1 | ProteinID:CBI32878 | ProteinID:CBI32878.3 | UniProt:D7TQ71 | InterPro:DUF309 | EMBL:FN596008 |
| EntrezGene:LOC100267181 | wikigene:LOC100267181 | PFAM:PF03745 | PANTHER:PTHR34796 | SUPFAM:SSF140663 | InterPro:TTHA0068_sf |
| UniParc:UPI00015CA441 | ArrayExpress:VIT_08s0040g00160 | EnsemblPlantsGene:VIT_08s0040g00160 | EnsemblPlants:VIT_08s0040g00160.t01 | RefSeq:XP_002278905 | RefSeq:XP_002278905.1 |
| RefSeq:XP_002278905.3 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:11099416..11100975
Molecular Weight (calculated)
28285.3 Da
IEP (calculated)
4.761
GRAVY (calculated)
-0.315
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSALLKL PFLCSSSSSS SSFPHISPYT SSPFSPFPNP KTQPNLLKHT STFHLLPISY RFSAVEDENE DECNFDDAVA LFNSRDYYRC HDFLEEIWNR
101: AEDPVRTLVH GILQCAVGLH HLFNQNHRGA MMELGEGLCK LRKMNFETGP FLQFEQEISA VLEFIYQTQL ELAACTDDFC IAMDQSERSY QLLGGYGAGQ
201: RLYHLEGDPN EIVYIVFSPE RSQGTGETPR RVKLPILNAT EEYLMASGYN
101: AEDPVRTLVH GILQCAVGLH HLFNQNHRGA MMELGEGLCK LRKMNFETGP FLQFEQEISA VLEFIYQTQL ELAACTDDFC IAMDQSERSY QLLGGYGAGQ
201: RLYHLEGDPN EIVYIVFSPE RSQGTGETPR RVKLPILNAT EEYLMASGYN
001: MAVSSKHFQV PSSFTLPPSS FFSSLIPSSP ISVTASTIRA STKFSSIRVR FSRRSIVRYN DHAGEDEEDS DEDKEEYWSF EEAVTLFNKR DYYKSHDALE
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
Arabidopsis Description
At2g41120 [Source:UniProtKB/TrEMBL;Acc:O80675]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.