Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G026810.1 | Barley | plastid | 79.41 | 81.82 |
| TraesCS4D01G124600.1 | Wheat | plastid | 76.1 | 81.5 |
| TraesCSU01G261400.1 | Wheat | plastid | 74.63 | 80.24 |
| TraesCS4B01G128100.1 | Wheat | plastid | 74.63 | 80.24 |
| KXG27654 | Sorghum | plastid | 59.19 | 55.52 |
| Os11t0130200-01 | Rice | plastid | 54.78 | 54.18 |
| Zm00001d052409_P001 | Maize | plastid | 58.09 | 47.73 |
| KRH66631 | Soybean | cytosol | 17.28 | 42.73 |
| KRG94998 | Soybean | plastid | 38.24 | 41.94 |
| VIT_08s0040g00160.t01 | Wine grape | plastid | 37.87 | 41.2 |
| Solyc03g044630.1.1 | Tomato | plastid | 37.13 | 39.92 |
| CDY06945 | Canola | plastid | 38.24 | 39.85 |
| AT2G41120.1 | Thale cress | plastid | 38.24 | 39.85 |
| CDY57582 | Canola | plastid | 37.13 | 39.45 |
| Bra016952.1-P | Field mustard | plastid | 37.5 | 39.23 |
| PGSC0003DMT400050859 | Potato | plastid | 36.03 | 38.43 |
| KRH66630 | Soybean | plastid | 16.91 | 29.3 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G026800.1 | EnsemblPlantsGene:HORVU4Hr1G026800 | Gene3D:1.10.3450.10 | InterPro:DUF309 | InterPro:TTHA0068_sf | PANTHER:PTHR34796 |
| PFAM:PF03745 | SEG:seg | SUPFAM:SSF140663 | UniParc:UPI000B4897AA | UniProt:A0A287NMI8 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr4H:+:161926763..161927663
Molecular Weight (calculated)
26554.3 Da
IEP (calculated)
6.431
GRAVY (calculated)
-0.383
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: QYVLPKGTXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXPYVLHRFN RGNIRRRGAG LRCRRRLLSA RGERPAPDDD ENGEEVAGFD AAVELFNGGE
101: YHACHDVVEE LWYSAEDPAR TLLHGVLQCA VGFHHLFNQN HRGAMMELGE GLCKLRRLRL EDYDDQGPFS RFRDEVAAVL SFLYRTQKEL AACNDELCLA
201: MDGSATSYQL LGDFAAGQRL YRQGVDAEGV PSILFSGRAS GDHLAPPCTV KLPSLHATEQ HLAALQRAHE YS
101: YHACHDVVEE LWYSAEDPAR TLLHGVLQCA VGFHHLFNQN HRGAMMELGE GLCKLRRLRL EDYDDQGPFS RFRDEVAAVL SFLYRTQKEL AACNDELCLA
201: MDGSATSYQL LGDFAAGQRL YRQGVDAEGV PSILFSGRAS GDHLAPPCTV KLPSLHATEQ HLAALQRAHE YS
001: MAVSSKHFQV PSSFTLPPSS FFSSLIPSSP ISVTASTIRA STKFSSIRVR FSRRSIVRYN DHAGEDEEDS DEDKEEYWSF EEAVTLFNKR DYYKSHDALE
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
Arabidopsis Description
At2g41120 [Source:UniProtKB/TrEMBL;Acc:O80675]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.