Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G261400.1 | Wheat | plastid | 56.0 | 60.87 |
| TraesCS4B01G128100.1 | Wheat | plastid | 56.0 | 60.87 |
| TraesCS4D01G124600.1 | Wheat | plastid | 56.0 | 60.63 |
| HORVU4Hr1G026810.1 | Barley | plastid | 56.73 | 59.09 |
| KXG27654 | Sorghum | plastid | 60.73 | 57.59 |
| HORVU4Hr1G026800.1 | Barley | cytosol | 54.18 | 54.78 |
| Zm00001d052409_P001 | Maize | plastid | 61.09 | 50.76 |
| KRG94998 | Soybean | plastid | 41.45 | 45.97 |
| KRH66631 | Soybean | cytosol | 18.18 | 45.45 |
| VIT_08s0040g00160.t01 | Wine grape | plastid | 40.73 | 44.8 |
| CDY06945 | Canola | plastid | 42.18 | 44.44 |
| Bra016952.1-P | Field mustard | plastid | 41.09 | 43.46 |
| CDY57582 | Canola | plastid | 39.64 | 42.58 |
| AT2G41120.1 | Thale cress | plastid | 39.64 | 41.76 |
| PGSC0003DMT400050859 | Potato | plastid | 38.55 | 41.57 |
| Solyc03g044630.1.1 | Tomato | plastid | 38.18 | 41.5 |
| KRH66630 | Soybean | plastid | 19.27 | 33.76 |
Protein Annotations
| EMBL:AK059458 | EnsemblPlants:Os11t0130200-01 | EnsemblPlantsGene:Os11g0130200 | EntrezGene:4349671 | Gene3D:1.10.3450.10 | InterPro:DUF309 |
| InterPro:TTHA0068_sf | PANTHER:PTHR34796 | PFAM:PF03745 | ProteinID:ABA91310.1 | ProteinID:BAF27494.1 | ProteinID:BAT12511.1 |
| ProteinID:EEE51577.1 | RefSeq:XP_015615883.1 | SEG:seg | SUPFAM:SSF140663 | UniParc:UPI000068254C | UniProt:Q2RB12 |
| MapMan:35.2 | : | : | : | : | : |
Description
Protein of unknown function DUF309 family protein. (Os11t0130200-01)
Coordinates
chr11:-:1390586..1391712
Molecular Weight (calculated)
30585.0 Da
IEP (calculated)
6.315
GRAVY (calculated)
-0.376
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHSHSAASL HAARLLPQQR TPTAPRTLLP AGGGLLLRRP HPPLHQQRRS RSSSRPDLRC RRRLLTARGD YDFYENYADE EGDEEEESEV IGGSFDAAVA
101: LFNGGEFHAC HDVVEELWYT AEEPTRTLLH AILQCAVAFH HLFNQNHRGA MMELGEGLCK LRKLRLDDDT TSPFSRFQEE VAAALNFIYR TQKELAACTD
201: DLCLTMDGSA TSYQLLGNFA AGQKLYRLET TTSADGDGVP TIIFSASSRL VRVKLPTLSA TEHHLAALQC TSEYI
101: LFNGGEFHAC HDVVEELWYT AEEPTRTLLH AILQCAVAFH HLFNQNHRGA MMELGEGLCK LRKLRLDDDT TSPFSRFQEE VAAALNFIYR TQKELAACTD
201: DLCLTMDGSA TSYQLLGNFA AGQKLYRLET TTSADGDGVP TIIFSASSRL VRVKLPTLSA TEHHLAALQC TSEYI
001: MAVSSKHFQV PSSFTLPPSS FFSSLIPSSP ISVTASTIRA STKFSSIRVR FSRRSIVRYN DHAGEDEEDS DEDKEEYWSF EEAVTLFNKR DYYKSHDALE
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
101: ALWIQAEEPT RTLIHGILQC AVGFHHLFNN NHKGAMMELG EGVCKLRKMN FEDGPFHEFE RDVSAVLEFV YQTQLELAAC SEDMCLTMDQ SDRSYQLLGG
201: YAAGESIYSL ETVLDFNNGM SETTSILFSP LHSSSEPTRV KLPTLTATDK HLLASTYDDR F
Arabidopsis Description
At2g41120 [Source:UniProtKB/TrEMBL;Acc:O80675]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.