Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97709 | Canola | plastid | 92.54 | 92.88 |
| Bra027204.1-P | Field mustard | plastid | 92.16 | 92.51 |
| CDY30115 | Canola | plastid | 91.79 | 92.13 |
| CDY58466 | Canola | plastid | 91.42 | 91.08 |
| Bra001608.1-P | Field mustard | plastid | 91.42 | 91.08 |
| CDX75847 | Canola | plastid | 90.3 | 89.96 |
| VIT_09s0002g06980.t01 | Wine grape | plastid | 67.16 | 63.83 |
| KRH47439 | Soybean | nucleus, plastid | 63.81 | 62.87 |
| PGSC0003DMT400073694 | Potato | plastid | 64.55 | 62.45 |
| KRH44469 | Soybean | nucleus, plastid | 63.43 | 61.37 |
| Solyc12g042770.1.1 | Tomato | nucleus, plastid | 63.43 | 61.37 |
| GSMUA_Achr11P... | Banana | plastid | 57.46 | 53.85 |
| Os03t0586500-01 | Rice | plastid | 54.1 | 53.51 |
| EER93872 | Sorghum | plastid | 52.99 | 53.38 |
| Zm00001d033098_P001 | Maize | plastid | 52.99 | 53.18 |
| TraesCS7B01G289200.1 | Wheat | plastid | 51.87 | 51.87 |
| TraesCS7D01G382900.1 | Wheat | plastid | 51.87 | 51.87 |
| Zm00001d013781_P001 | Maize | plastid | 51.87 | 51.67 |
| TraesCS7A01G386300.1 | Wheat | plastid | 51.49 | 51.11 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820827 | UniProt:A0A178V9N9 | ProteinID:AEE75732.1 | ArrayExpress:AT3G15840 | EnsemblPlantsGene:AT3G15840 |
| RefSeq:AT3G15840 | TAIR:AT3G15840 | RefSeq:AT3G15840-TAIR-G | EnsemblPlants:AT3G15840.1 | TAIR:AT3G15840.1 | EMBL:AY035025 |
| EMBL:AY133879 | Unigene:At.24608 | ProteinID:BAB02315.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0010478 | RefSeq:NP_566528.1 | ProteinID:OAP02408.1 |
| Symbol:PIFI | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR32429 | PANTHER:PTHR32429:SF9 | UniProt:Q9LVZ5 | UniParc:UPI00000A51BB | SEG:seg | : |
Description
PIFIPost-illumination chlorophyll fluorescence increase [Source:UniProtKB/TrEMBL;Acc:Q9LVZ5]
Coordinates
chr3:-:5356587..5358596
Molecular Weight (calculated)
29692.4 Da
IEP (calculated)
5.880
GRAVY (calculated)
-0.340
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAANTSAV FASPSQPLSS KRSFLYSSRI GPILRRFPRK KLDLQVKAVA TTLAPLEEIK EYKLPSWAMF EMGTAPVYWK TMNGLPPTSG EKLKLFYNPA
101: ASKLTLNEDY GVAFNGGFNQ PIMCGGEPRA MLKKDRGKAD SPIYTMQICI PKHAVNLIFS FTNGVDWDGP YRLQFQVPKR WQNKPIEFFN EGLANELSQD
201: GACERAIFPD SNVVPTRCTM IANLTVEGGD RCNLDLVPGC MDTNSEHFNP YANVDDGSCP LELSDSDE
101: ASKLTLNEDY GVAFNGGFNQ PIMCGGEPRA MLKKDRGKAD SPIYTMQICI PKHAVNLIFS FTNGVDWDGP YRLQFQVPKR WQNKPIEFFN EGLANELSQD
201: GACERAIFPD SNVVPTRCTM IANLTVEGGD RCNLDLVPGC MDTNSEHFNP YANVDDGSCP LELSDSDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.