Factsheet for Os03t0586500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0311300-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15840.1	Os11t0311300-03	AT1G60080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G382900.1	Wheat	plastid	76.01	76.87
TraesCS7B01G289200.1	Wheat	plastid	76.01	76.87
Zm00001d033098_P001	Maize	plastid	74.54	75.66
EER93872	Sorghum	plastid	73.8	75.19
TraesCS7A01G386300.1	Wheat	plastid	74.91	75.19
Zm00001d013781_P001	Maize	plastid	70.85	71.38
CDX97709	Canola	plastid	54.61	55.43
CDY30115	Canola	plastid	54.61	55.43
Bra001608.1-P	Field mustard	plastid	54.98	55.39
Bra027204.1-P	Field mustard	plastid	54.24	55.06
CDX75847	Canola	plastid	54.61	55.02
GSMUA_Achr11P...	Banana	plastid	57.93	54.9
PGSC0003DMT400073694	Potato	plastid	56.09	54.87
CDY58466	Canola	plastid	54.24	54.65
AT3G15840.1	Thale cress	plastid	53.51	54.1
VIT_09s0002g06980.t01	Wine grape	plastid	56.09	53.9
KRH44469	Soybean	nucleus, plastid	54.24	53.07
Solyc12g042770.1.1	Tomato	nucleus, plastid	54.24	53.07
KRH47439	Soybean	nucleus, plastid	52.77	52.57

Protein Annotations

MapMan:35.2	EntrezGene:4333342	ProteinID:AAT76332.1	ProteinID:ABF97351.1	EMBL:AK059901	EMBL:AK068097
ProteinID:BAF12483.1	ProteinID:BAS85097.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0009987	GO:GO:0010478	EnsemblPlantsGene:Os03g0586500	EnsemblPlants:Os03t0586500-01	PANTHER:PTHR32429
PANTHER:PTHR32429:SF9	UniProt:Q6F2V2	UniParc:UPI00003E1FEA	RefSeq:XP_015631726.1	SEG:seg	:

Description

Similar to chloroplast post-illumination chlorophyll fluorescence increase protein. (Os03t0586500-01)

Coordinates

chr3:+:21634990..21637232

Molecular Weight (calculated)

29145.4 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.302

Length

271 amino acids

Sequence
(BLAST)

001: MATLSSCSRL STGGGAVQRR PRRPASAATI TCHRSSSSSS SARVVRTGAA AAPAAATAPA VPQTNECSLP TWAEFELGKA PVYWKTMNGL PPSAGEGLIL
101: FYNPAATKMT PNAQFGIAFN GGFNQPIMCG GEPRQMTLQE RGSADPPIYT IRIRVPQHAM TLVFSFTNGV DWDGPYTLKF RVPKPWLNKP LSFFNEGLAD
201: ELNREGACDR AIFPDENVVI TSCEMGSYYE EGGDRCKLDI VSGCMDPNSH MFDPLATVDD GSCPMDSDSE E

Best Arabidopsis Sequence Match ( AT3G15840.1 )
(BLAST)

001: MAAAANTSAV FASPSQPLSS KRSFLYSSRI GPILRRFPRK KLDLQVKAVA TTLAPLEEIK EYKLPSWAMF EMGTAPVYWK TMNGLPPTSG EKLKLFYNPA
101: ASKLTLNEDY GVAFNGGFNQ PIMCGGEPRA MLKKDRGKAD SPIYTMQICI PKHAVNLIFS FTNGVDWDGP YRLQFQVPKR WQNKPIEFFN EGLANELSQD
201: GACERAIFPD SNVVPTRCTM IANLTVEGGD RCNLDLVPGC MDTNSEHFNP YANVDDGSCP LELSDSDE

Arabidopsis Description

PIFIPost-illumination chlorophyll fluorescence increase [Source:UniProtKB/TrEMBL;Acc:Q9LVZ5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.