Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94486 | Canola | plastid | 70.95 | 70.08 |
| GSMUA_Achr11P... | Banana | cytosol | 40.25 | 69.78 |
| Bra029436.1-P | Field mustard | plastid | 65.98 | 65.16 |
| CDX86723 | Canola | plastid | 65.56 | 64.75 |
| GSMUA_Achr5P18820_001 | Banana | plastid | 47.3 | 50.67 |
| KRH77428 | Soybean | endoplasmic reticulum, golgi | 49.79 | 47.06 |
| Os03t0247000-01 | Rice | plastid | 44.4 | 46.12 |
| OQU92918 | Sorghum | plastid | 43.15 | 45.22 |
| AT4G25370.1 | Thale cress | plastid | 44.4 | 44.96 |
| Solyc08g079660.2.1 | Tomato | plastid | 43.98 | 44.35 |
| TraesCS4B01G224500.1 | Wheat | plastid | 41.08 | 43.23 |
| TraesCS4D01G225100.1 | Wheat | plastid | 41.08 | 43.23 |
| TraesCS4A01G079500.1 | Wheat | plastid | 40.66 | 42.79 |
| Zm00001d028414_P002 | Maize | plastid | 43.15 | 42.45 |
| HORVU4Hr1G063150.3 | Barley | plastid | 41.49 | 39.68 |
| PGSC0003DMT400010010 | Potato | plastid | 46.06 | 34.91 |
| Zm00001d047920_P003 | Maize | plastid | 41.08 | 34.38 |
Protein Annotations
| Gene3D:1.10.1780.10 | MapMan:19.4.2.9.3 | PDB:4Y0C | EntrezGene:826814 | ProteinID:AEE83092.1 | EMBL:AK119030 |
| ArrayExpress:AT4G12060 | EnsemblPlantsGene:AT4G12060 | RefSeq:AT4G12060 | TAIR:AT4G12060 | RefSeq:AT4G12060-TAIR-G | EnsemblPlants:AT4G12060.1 |
| TAIR:AT4G12060.1 | EMBL:AY087178 | Unigene:At.43268 | ProteinID:CAB40947.1 | ProteinID:CAB78249.1 | InterPro:Clp_N |
| InterPro:Clp_N_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009532 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 | GO:GO:0019538 | GO:GO:0043424 | InterPro:IPR036628 |
| RefSeq:NP_567386.1 | PFAM:PF02861 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF124 | UniProt:Q8GW78 |
| SUPFAM:SSF81923 | UniParc:UPI00000ADFFC | : | : | : | : |
Description
CLPT2ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GW78]
Coordinates
chr4:-:7227971..7229993
Molecular Weight (calculated)
26562.0 Da
IEP (calculated)
9.346
GRAVY (calculated)
-0.166
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAHSSCNFA LTNPIISQID SFSKKKLSVP LYFFSTRKAL TNPWLGVVDS SLSLTSPVSA LQTNRPRRIH KSAISSLPTA NPDLVVSDAK KPKWSWRAIK
101: SFAMGELEAR KLKYPNTGTE ALLMGILIEG TSFTSKFLRA NKIMLYKVRE ETVKLLGKAD MYFFSPEHPP LTEDAQRALD SALDQNLKAG GIGEVMPAHI
201: LLGIWSEVES PGHKILATLG FTDEKSKELE SFASESGFLD E
101: SFAMGELEAR KLKYPNTGTE ALLMGILIEG TSFTSKFLRA NKIMLYKVRE ETVKLLGKAD MYFFSPEHPP LTEDAQRALD SALDQNLKAG GIGEVMPAHI
201: LLGIWSEVES PGHKILATLG FTDEKSKELE SFASESGFLD E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.