Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32243 | Canola | cytosol | 88.4 | 89.72 |
| CDY34469 | Canola | cytosol | 87.55 | 88.87 |
| Bra038459.1-P | Field mustard | cytosol | 88.19 | 85.13 |
| VIT_00s0508g00020.t01 | Wine grape | cytosol | 70.89 | 70.29 |
| KRH51180 | Soybean | cytosol | 69.2 | 69.2 |
| KRH01973 | Soybean | cytosol | 68.57 | 68.57 |
| PGSC0003DMT400065476 | Potato | cytosol | 67.93 | 68.08 |
| Solyc08g065990.2.1 | Tomato | cytosol | 67.09 | 67.37 |
| TraesCS5B01G392600.1 | Wheat | cytosol, plastid | 66.67 | 67.23 |
| TraesCS5A01G387500.1 | Wheat | cytosol | 66.46 | 67.02 |
| TraesCS5D01G397400.1 | Wheat | cytosol, plastid | 66.46 | 67.02 |
| GSMUA_Achr4P03650_001 | Banana | cytosol | 66.88 | 67.02 |
| TraesCS5B01G053000.1 | Wheat | cytosol, plastid | 66.24 | 66.81 |
| GSMUA_Achr3P29280_001 | Banana | cytosol | 66.24 | 66.67 |
| TraesCS5A01G047900.1 | Wheat | cytosol, plastid | 59.07 | 65.42 |
| KXG37554 | Sorghum | cytosol, plastid | 64.77 | 65.18 |
| Zm00001d034012_P001 | Maize | cytosol, plastid | 64.14 | 64.54 |
| HORVU5Hr1G094840.5 | Barley | mitochondrion, plastid | 66.46 | 64.15 |
| Os03t0748700-01 | Rice | plasma membrane | 64.35 | 64.08 |
| Zm00001d013272_P001 | Maize | cytosol | 64.14 | 62.3 |
| VIT_00s1693g00010.t01 | Wine grape | cytosol | 10.55 | 57.47 |
Protein Annotations
| Gene3D:3.40.50.1780 | Gene3D:3.40.950.20 | MapMan:7.11.3.2.4 | EntrezGene:827338 | UniProt:A0A178V110 | ProteinID:AEE83748.1 |
| EMBL:AK117970 | ArrayExpress:AT4G16440 | EnsemblPlantsGene:AT4G16440 | RefSeq:AT4G16440 | TAIR:AT4G16440 | RefSeq:AT4G16440-TAIR-G |
| EnsemblPlants:AT4G16440.1 | TAIR:AT4G16440.1 | Unigene:At.33082 | EMBL:BT008777 | ProteinID:CAB10420.1 | ProteinID:CAB78686.1 |
| ProteinID:CAC44620.1 | InterPro:Fe_hydrogenase | InterPro:Fe_hydrogenase_lsu_C | InterPro:Fe_hydrogenase_ssu | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003954 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0046872 |
| GO:GO:0051536 | GO:GO:0051539 | GO:GO:0055114 | GO:GO:0070482 | RefSeq:NP_567496.4 | ProteinID:OAO98742.1 |
| PFAM:PF02256 | PFAM:PF02906 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020094 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF6 | UniProt:Q94CL6 |
| SMART:SM00902 | SUPFAM:SSF53920 | UniParc:UPI00000A21F1 | : | : | : |
Description
NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
Coordinates
chr4:-:9269094..9271669
Molecular Weight (calculated)
52506.8 Da
IEP (calculated)
6.590
GRAVY (calculated)
-0.269
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.