CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51180	Soybean	cytosol	95.36	95.36
VIT_00s0508g00020.t01	Wine grape	cytosol	76.58	75.94
PGSC0003DMT400065476	Potato	cytosol	71.31	71.46
Solyc08g065990.2.1	Tomato	cytosol	70.89	71.19
CDY34469	Canola	cytosol	68.99	70.02
CDY32243	Canola	cytosol	68.57	69.59
AT4G16440.1	Thale cress	cytosol	68.57	68.57
TraesCS5A01G387500.1	Wheat	cytosol	67.3	67.87
GSMUA_Achr4P03650_001	Banana	cytosol	67.72	67.86
TraesCS5B01G392600.1	Wheat	cytosol, plastid	66.88	67.45
TraesCS5B01G053000.1	Wheat	cytosol, plastid	66.88	67.45
TraesCS5D01G397400.1	Wheat	cytosol, plastid	66.67	67.23
GSMUA_Achr3P29280_001	Banana	cytosol	66.46	66.88
TraesCS5A01G047900.1	Wheat	cytosol, plastid	60.34	66.82
Bra038459.1-P	Field mustard	cytosol	68.78	66.4
Os03t0748700-01	Rice	plasma membrane	65.4	65.13
KXG37554	Sorghum	cytosol, plastid	64.35	64.76
Zm00001d034012_P001	Maize	cytosol, plastid	63.92	64.33
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	66.46	64.15
Zm00001d013272_P001	Maize	cytosol	64.35	62.5
VIT_00s1693g00010.t01	Wine grape	cytosol	11.18	60.92

Protein Annotations

EntrezGene:100806757	Gene3D:3.40.50.1780	Gene3D:3.40.950.20	MapMan:7.11.3.2.4	EMBL:ACUP02010293	InterPro:Fe_hydrogenase
InterPro:Fe_hydrogenase_lsu_C	InterPro:Fe_hydrogenase_ssu	EnsemblPlantsGene:GLYMA_17G007300	GO:GO:0003674	GO:GO:0003824	GO:GO:0003954
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051536	GO:GO:0055114	UniProt:I1MQZ3
EnsemblPlants:KRH01973	ProteinID:KRH01973	ProteinID:KRH01973.1	PFAM:PF02256	PFAM:PF02906	PANTHER:PTHR11615
PANTHER:PTHR11615:SF6	SMART:SM00902	SUPFAM:SSF53920	UniParc:UPI000233EC1E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:-:621626..627757

Molecular Weight (calculated)

52832.4 Da

IEP (calculated)

6.613

GRAVY (calculated)

-0.169

Length

474 amino acids

Sequence
(BLAST)

001: MSEKFSAALR IGDLNDFIAP SQACIVSLKG LKKNDKPEVS NAIKQVKFEP VKISLKDCLA CSGCVTSAET VMLEKQSLDE FLNNINSGKA VIVSLSPQSR
101: ASIAFHFGIS PIQAFKKLTR FFKSLGVKAI FDTSCSRDLT LVESCVEFIT RYRQNQVVED ERSKSSLPMI ASACPGWICY AEKQLGSFVL PYISSVKSPQ
201: QTIGVIIKNY VCQELGLRPE EVYHVTVMPC YDKKLEAARD DFVFQFESHA EGRESEINMI SEVDSVLTTG EVLELIQSKE VDFKSLDETT LDKILTNINE
301: DGYLYGVSGS SGGYAETIFR YAAKTLFGRQ IDGPLTFKNI RNSDFQEVTL EVEGKTVLKF ALCYGFRNLQ NIVRKLKTGK CDYHFLEIMA CPSGCLNGGG
401: QIKPSSGQSP KELSQLLESV YMENVLVASP FDNPIVKGLY DKWLEQPGSV KAGRYMHTQY HPVEKSITSQ LHNW

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.