Factsheet for GSMUA_Achr3P29280_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03650_001	Banana	cytosol	85.99	85.62
TraesCS5A01G387500.1	Wheat	cytosol	71.76	71.91
Zm00001d034012_P001	Maize	cytosol, plastid	71.76	71.76
TraesCS5B01G392600.1	Wheat	cytosol, plastid	71.55	71.7
KXG37554	Sorghum	cytosol, plastid	71.55	71.55
TraesCS5D01G397400.1	Wheat	cytosol, plastid	71.13	71.28
TraesCS5B01G053000.1	Wheat	cytosol, plastid	70.91	71.06
VIT_00s0508g00020.t01	Wine grape	cytosol	71.34	70.29
Os03t0748700-01	Rice	plasma membrane	70.91	70.17
TraesCS5A01G047900.1	Wheat	cytosol, plastid	63.06	69.39
Zm00001d013272_P001	Maize	cytosol	70.91	68.44
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	70.28	67.41
PGSC0003DMT400065476	Potato	cytosol	67.3	67.02
Solyc08g065990.2.1	Tomato	cytosol	67.09	66.95
KRH01973	Soybean	cytosol	66.88	66.46
AT4G16440.1	Thale cress	cytosol	66.67	66.24
KRH51180	Soybean	cytosol	66.67	66.24
CDY34469	Canola	cytosol	65.18	65.74
CDY32243	Canola	cytosol	64.76	65.31
Bra038459.1-P	Field mustard	cytosol	64.97	62.32
VIT_00s1693g00010.t01	Wine grape	cytosol	9.55	51.72

Protein Annotations

EnsemblPlants:GSMUA_Achr3P29280_001	EnsemblPlants:GSMUA_Achr3T29280_001	EnsemblPlantsGene:GSMUA_Achr3G29280_001	Gene3D:3.40.50.1780	Gene3D:3.40.950.20	InterPro:Fe_hydrogenase
InterPro:Fe_hydrogenase_lsu_C	InterPro:Fe_hydrogenase_ssu	PANTHER:PTHR11615	PANTHER:PTHR11615:SF6	PFAM:PF02256	PFAM:PF02906
SEG:seg	SMART:SM00902	SUPFAM:SSF53920	UniParc:UPI0002950F44	UniProt:M0SIU4	MapMan:7.11.3.2.4

Description

Putative Cytosolic Fe-S cluster assembly factor NARFL [Source:GMGC_GENE;Acc:GSMUA_Achr3G29280_001]

Coordinates

chr3:+:28476123..28486214

Molecular Weight (calculated)

52581.1 Da

IEP (calculated)

7.141

GRAVY (calculated)

-0.254

Length

471 amino acids

Sequence
(BLAST)

001: MSEKFSPALR LADLNDFIAP SQDCIVSLKA IKSKHEKAEN QEKVRSPSQP LQTEAVKISL KDCLACSGCI TSAETIMLEK QSLDEFLAHI NYGDTVVVSI
101: SPQSRASLAA YFDLSPSQVL RKVTTLFKSL GAKAVYDTSC SRDLSLIESC NEFISRYQQH GQSLPMLSSA CPGWICYAEK TLGSYILPYI SHVKSPQQTI
201: GAAIKHHIVQ KFGLKLDNVY HVTVMPCYDK KLEAARDDFS FTIDKGENGR PNSVMTIPEV DSVLTTGEVL DLIQSKSIDF KTLKESPLDS MLTNVDKKGH
301: LFGVSGGSGG YAETVFCHAA QKLFGREIQR PIEFRHIRNS DFREVTLEVD GETVLKFALC YGFRNLQNIV RKIKMGKCDY HFIEVMACPS GCLNGGGQIK
401: PRTGQSTKDL IQQLEILYMQ DVELADPFDN PVVQRLYDEW LGQPGSEKAK RFLHTEYHPL VKSTASQLHN W

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.