Factsheet for TraesCS5B01G053000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G392600.1	Wheat	cytosol, plastid	98.3	98.3
TraesCS5A01G047900.1	Wheat	cytosol, plastid	89.15	97.9
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	96.38	92.26
Os03t0748700-01	Rice	plasma membrane	85.53	84.45
KXG37554	Sorghum	cytosol, plastid	83.4	83.23
Zm00001d034012_P001	Maize	cytosol, plastid	82.34	82.17
Zm00001d013272_P001	Maize	cytosol	83.19	80.12
GSMUA_Achr3P29280_001	Banana	cytosol	71.06	70.91
GSMUA_Achr4P03650_001	Banana	cytosol	70.85	70.4
VIT_00s0508g00020.t01	Wine grape	cytosol	70.64	69.46
PGSC0003DMT400065476	Potato	cytosol	68.51	68.08
CDY34469	Canola	cytosol	66.6	67.02
CDY32243	Canola	cytosol	66.6	67.02
Solyc08g065990.2.1	Tomato	cytosol	67.23	66.95
KRH01973	Soybean	cytosol	67.45	66.88
KRH51180	Soybean	cytosol	67.23	66.67
AT4G16440.1	Thale cress	cytosol	66.81	66.24
Bra038459.1-P	Field mustard	cytosol	66.6	63.75
VIT_00s1693g00010.t01	Wine grape	cytosol	8.72	47.13

Protein Annotations

EnsemblPlants:TraesCS5B01G053000.1	EnsemblPlantsGene:TraesCS5B01G053000	Gene3D:3.40.50.1780	Gene3D:3.40.950.20	InterPro:Fe_hydrogenase	InterPro:Fe_hydrogenase_lsu_C
InterPro:Fe_hydrogenase_ssu	PANTHER:PTHR11615	PANTHER:PTHR11615:SF6	PFAM:PF02256	PFAM:PF02906	SEG:seg
SMART:SM00902	SUPFAM:SSF53920	MapMan:7.11.3.2.4	:	:	:

Description

No Description!

Coordinates

chr5B:+:57699902..57704072

Molecular Weight (calculated)

51851.0 Da

IEP (calculated)

7.315

GRAVY (calculated)

-0.170

Length

470 amino acids

Sequence
(BLAST)

001: MSSSRFSPAL QASDLNDFIA PSQDCVVSLN KNSAASRLPI KKKQVVVSTK PPEESVKISL KDCLACSGCI TSAETVMLEK QSLDDFVTRT NSGKTVIVSV
101: SPQSRASLAA FFGLSQSQVF RKLTALFKSM GVKAVYDTSS SRDLALIEAC NEFISRYKLS QLSSDKEVGT SLSVLSSACP GWICYAEKTL GSYILPYISS
201: VKSPQQVIGA AIKHHMVEKL GLKPYDVYHV TVMPCYDKKL EAVRGDFVFS VEEKEVTEVD SVLTTGEVLD LIQSKSVDFK TMEESPLDRL LTNVDDDGHL
301: YGVSGGSGGY AETIFRYAAR ALFNREIEGP LDFKILRNSD FREVTLEVEG SPVLKFALCY GFRNLQNIVR KVKMGKCEYQ FIEVMACPSG CLNGGGQIKP
401: AKGQSPKDLI QQLESVYTQD VSVSNPFDNP IAKRLYDDWL VQPGSDNAKR YLHTQYHPVV KSVTSQLQNW

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.