Factsheet for Zm00001d013272_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37554	Sorghum	cytosol, plastid	91.8	95.12
Zm00001d034012_P001	Maize	cytosol, plastid	91.39	94.69
TraesCS5A01G387500.1	Wheat	cytosol	80.33	83.4
Os03t0748700-01	Rice	plasma membrane	81.35	83.4
TraesCS5D01G397400.1	Wheat	cytosol, plastid	80.12	83.19
TraesCS5B01G053000.1	Wheat	cytosol, plastid	80.12	83.19
TraesCS5B01G392600.1	Wheat	cytosol, plastid	79.92	82.98
TraesCS5A01G047900.1	Wheat	cytosol, plastid	72.34	82.48
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	79.3	78.82
GSMUA_Achr3P29280_001	Banana	cytosol	68.44	70.91
GSMUA_Achr4P03650_001	Banana	cytosol	68.44	70.61
PGSC0003DMT400065476	Potato	cytosol	65.16	67.23
VIT_00s0508g00020.t01	Wine grape	cytosol	65.57	66.95
Solyc08g065990.2.1	Tomato	cytosol	63.32	65.47
CDY32243	Canola	cytosol	62.3	65.1
CDY34469	Canola	cytosol	62.09	64.88
KRH51180	Soybean	cytosol	62.7	64.56
KRH01973	Soybean	cytosol	62.5	64.35
AT4G16440.1	Thale cress	cytosol	62.3	64.14
Bra038459.1-P	Field mustard	cytosol	62.5	62.12
VIT_00s1693g00010.t01	Wine grape	cytosol	7.38	41.38

Protein Annotations

EnsemblPlants:Zm00001d013272_P001	EnsemblPlants:Zm00001d013272_T001	EnsemblPlantsGene:Zm00001d013272	EntrezGene:103625884	Gene3D:3.40.50.1780	Gene3D:3.40.950.20
InterPro:Fe_hydrogenase	InterPro:Fe_hydrogenase_lsu_C	InterPro:Fe_hydrogenase_ssu	PANTHER:PTHR11615	PANTHER:PTHR11615:SF6	PFAM:PF02256
PFAM:PF02906	ProteinID:AQK62880.1	SEG:seg	SMART:SM00902	SUPFAM:SSF53920	UniParc:UPI000842D327
UniProt:A0A1D6GH75	MapMan:7.11.3.2.4	:	:	:	:

Description

Protein NAR1

Coordinates

chr5:+:7535439..7540877

Molecular Weight (calculated)

54023.4 Da

IEP (calculated)

6.665

GRAVY (calculated)

-0.242

Length

488 amino acids

Sequence
(BLAST)

001: MSSSRFSPAL QASDLNDFIA PSQDCIISLN KNTSSSSRRP QPFQQTLAHI PDTEILQNKQ KETTVSSKPP EEAVKISLKD CLACSGCITS AETVMLEKQS
101: LGDFIDRINS DKAVIVSVSP QSRASLAAFF GLSQSQVLRK LTSLFKSIGV KAVFDTSSSR DLSLIEACNE FVSRYQRSQP SSGQEAGANL PLISSACPGW
201: ICYAEKTLGS YILPYISSVK SPQQAIGAAI KHHVAERLGL KPYHVYHVTV MPCYDKKLEA VRDDFTFSVD GKEVTEVDSV LTTGEVLDLI QSKSIDFKTV
301: EESSLDRLLT NVDEEGHLYG VSGGSGGYAE TIFRYVAHVI YKREIEGPLD FRILRNSDFR EITLEVEGKP VLKFALCYGF RNLQNVVRKI KMGKCEYHFI
401: EVMACPSGCL NGGGQLKPVE GQSAKELIQQ LESVYTQDIL ISDPFRNPIA KKLYDEWLGQ PGSENAKKYL HTEYHPVVKS VASQLQNW

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.