CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034012_P001	Maize	cytosol, plastid	96.39	96.39
Zm00001d013272_P001	Maize	cytosol	95.12	91.8
Os03t0748700-01	Rice	plasma membrane	85.99	85.08
TraesCS5D01G397400.1	Wheat	cytosol, plastid	83.44	83.62
TraesCS5A01G387500.1	Wheat	cytosol	83.44	83.62
TraesCS5B01G053000.1	Wheat	cytosol, plastid	83.23	83.4
TraesCS5B01G392600.1	Wheat	cytosol, plastid	83.01	83.19
TraesCS5A01G047900.1	Wheat	cytosol, plastid	74.52	82.01
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	82.38	79.02
GSMUA_Achr3P29280_001	Banana	cytosol	71.55	71.55
GSMUA_Achr4P03650_001	Banana	cytosol	70.91	70.61
VIT_00s0508g00020.t01	Wine grape	cytosol	68.37	67.36
PGSC0003DMT400065476	Potato	cytosol	67.09	66.81
CDY32243	Canola	cytosol	65.18	65.74
CDY34469	Canola	cytosol	64.97	65.52
Solyc08g065990.2.1	Tomato	cytosol	65.18	65.04
AT4G16440.1	Thale cress	cytosol	65.18	64.77
KRH51180	Soybean	cytosol	64.97	64.56
KRH01973	Soybean	cytosol	64.76	64.35
Bra038459.1-P	Field mustard	cytosol	65.39	62.73
VIT_00s1693g00010.t01	Wine grape	cytosol	7.86	42.53

Protein Annotations

Gene3D:3.40.50.1780	Gene3D:3.40.950.20	MapMan:7.11.3.2.4	UniProt:A0A1B6QHZ5	InterPro:Fe_hydrogenase	InterPro:Fe_hydrogenase_lsu_C
InterPro:Fe_hydrogenase_ssu	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0009628	GO:GO:0070482	EnsemblPlants:KXG37554	ProteinID:KXG37554
ProteinID:KXG37554.1	PFAM:PF02256	PFAM:PF02906	PANTHER:PTHR11615	PANTHER:PTHR11615:SF6	SMART:SM00902
EnsemblPlantsGene:SORBI_3001G089800	SUPFAM:SSF53920	UniParc:UPI00081ADD4B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:6959065..6968705

Molecular Weight (calculated)

52045.2 Da

IEP (calculated)

6.701

GRAVY (calculated)

-0.216

Length

471 amino acids

Sequence
(BLAST)

001: MSSSRFSPVL QASDLNDFIA PSQDCIISLN KNTSSSRRLQ NKQKETTVSS KPPEEAVKIS LKDCLACSGC ITSAETVMLE KQSLGDFIDR INSDKAVIVS
101: VSPQSRASLA AFFGLSQSQV LRKLTALLKS IGVKAVFDTS SSRDLSLIEA CNEFVSRYEK NQSSSGKEAG ANLPMISSAC PGWICYAEKT LGSYILPYIS
201: SVKSPQQAIG AAIKHHVVEK LGLKPYDVYH VTVMPCYDKK LEAVRDDFTF SVDGKEVTEV DSVLTTGEVL DLIQSKSIDF KTLEESSLDR LLTNVDEEGH
301: LYGVSGGSGG YAEMVFRYAA HVIYKREIEG PLDFRILRNS DFREITLEVE GKPVLKFALC YGFRNLQNIV RKIKMGKCEY HFIEVMACPS GCLNGGGQLK
401: PVQGQSSKEL IQQLESVYTQ DISILDPFSN PIAKKLYDEW LGQPGSENAK KYLHTEYHPV VKSVASQLQN W

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.