Factsheet for Zm00001d034012_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37554	Sorghum	cytosol, plastid	96.39	96.39
Zm00001d013272_P001	Maize	cytosol	94.69	91.39
Os03t0748700-01	Rice	plasma membrane	84.71	83.82
TraesCS5A01G387500.1	Wheat	cytosol	82.38	82.55
TraesCS5D01G397400.1	Wheat	cytosol, plastid	82.17	82.34
TraesCS5B01G053000.1	Wheat	cytosol, plastid	82.17	82.34
TraesCS5B01G392600.1	Wheat	cytosol, plastid	81.95	82.13
TraesCS5A01G047900.1	Wheat	cytosol, plastid	73.67	81.07
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	81.32	78.0
GSMUA_Achr3P29280_001	Banana	cytosol	71.76	71.76
GSMUA_Achr4P03650_001	Banana	cytosol	71.76	71.46
VIT_00s0508g00020.t01	Wine grape	cytosol	68.37	67.36
PGSC0003DMT400065476	Potato	cytosol	66.67	66.38
CDY32243	Canola	cytosol	64.54	65.1
CDY34469	Canola	cytosol	64.33	64.88
Solyc08g065990.2.1	Tomato	cytosol	64.97	64.83
AT4G16440.1	Thale cress	cytosol	64.54	64.14
KRH51180	Soybean	cytosol	64.54	64.14
KRH01973	Soybean	cytosol	64.33	63.92
Bra038459.1-P	Field mustard	cytosol	64.76	62.12
VIT_00s1693g00010.t01	Wine grape	cytosol	7.64	41.38

Protein Annotations

EnsemblPlants:Zm00001d034012_P001	EnsemblPlants:Zm00001d034012_T001	EnsemblPlantsGene:Zm00001d034012	EntrezGene:103644006	Gene3D:3.40.50.1780	Gene3D:3.40.950.20
InterPro:Fe_hydrogenase	InterPro:Fe_hydrogenase_lsu_C	InterPro:Fe_hydrogenase_ssu	PANTHER:PTHR11615	PANTHER:PTHR11615:SF6	PFAM:PF02256
PFAM:PF02906	ProteinID:ONM09231.1	SEG:seg	SMART:SM00902	SUPFAM:SSF53920	UniParc:UPI0004DEACD9
UniProt:A0A1D6L4C0	MapMan:7.11.3.2.4	:	:	:	:

Description

Protein NAR1

Coordinates

chr1:-:281133200..281140918

Molecular Weight (calculated)

52004.0 Da

IEP (calculated)

6.766

GRAVY (calculated)

-0.229

Length

471 amino acids

Sequence
(BLAST)

001: MSSSRFSPVL QASDLNDFIA PSQDCIISLN KNTSSSRRLQ KNQKETTVSS KPPEEAVKIS LKDCLACSGC ITSAETVMLE KQSLSDFIDH INSDKAVIVS
101: VSPQSRASLA AFFGLSQSQV LRKLTALFKS IGVKAVFDTS SSRDLSLIEA CNEFVSRYQK NHSCSGQEAG ANLPMISSAC PGWICYAEKT LGSYILPYIS
201: SVKSPQQAIG AAIKHHVVDK LGLKPYDVYH VTVMPCYDKK LEAVRDDFTF SVDGKEVKEV DSVLTTGEVL DLIQSKSIDF KTVEESSLDR LLTNVDEEGH
301: LYGVSGGSGG YAETVFRYGA NVIYKREIEG PLDFRILRNS DFREITLEVE GKPVLKFALC YGFRNLQNIV RKIKMGKCEY HFIEVMACPS GCLNGGGQLK
401: PVQGQSAKEL IQQLESVYTQ DISISDPFSN PIAKKLYDEW LGQPGSENAK KYLHTEYHPV VKSVASQLQN W

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.