Factsheet for Solyc08g065990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065476	Potato	cytosol	96.61	96.41
VIT_00s0508g00020.t01	Wine grape	cytosol	73.94	73.01
KRH51180	Soybean	cytosol	71.61	71.31
KRH01973	Soybean	cytosol	71.19	70.89
GSMUA_Achr4P03650_001	Banana	cytosol	69.07	68.92
CDY34469	Canola	cytosol	67.16	67.88
CDY32243	Canola	cytosol	66.95	67.67
TraesCS5D01G397400.1	Wheat	cytosol, plastid	66.95	67.23
TraesCS5B01G392600.1	Wheat	cytosol, plastid	66.95	67.23
TraesCS5B01G053000.1	Wheat	cytosol, plastid	66.95	67.23
TraesCS5A01G387500.1	Wheat	cytosol	66.95	67.23
GSMUA_Achr3P29280_001	Banana	cytosol	66.95	67.09
AT4G16440.1	Thale cress	cytosol	67.37	67.09
TraesCS5A01G047900.1	Wheat	cytosol, plastid	59.75	65.89
KXG37554	Sorghum	cytosol, plastid	65.04	65.18
Zm00001d034012_P001	Maize	cytosol, plastid	64.83	64.97
Bra038459.1-P	Field mustard	cytosol	67.16	64.56
Os03t0748700-01	Rice	plasma membrane	64.62	64.08
HORVU5Hr1G094840.5	Barley	mitochondrion, plastid	66.1	63.54
Zm00001d013272_P001	Maize	cytosol	65.47	63.32
VIT_00s1693g00010.t01	Wine grape	cytosol	10.59	57.47

Protein Annotations

Gene3D:3.40.50.1780	Gene3D:3.40.950.20	MapMan:7.11.3.2.4	InterPro:Fe_hydrogenase	InterPro:Fe_hydrogenase_lsu_C	InterPro:Fe_hydrogenase_ssu
GO:GO:0003674	GO:GO:0003824	GO:GO:0003954	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0051536	GO:GO:0055114	UniProt:K4CLH7	PFAM:PF02256	PFAM:PF02906	PANTHER:PTHR11615
PANTHER:PTHR11615:SF6	SMART:SM00902	SUPFAM:SSF53920	EnsemblPlantsGene:Solyc08g065990.2	EnsemblPlants:Solyc08g065990.2.1	UniParc:UPI000276B8AE

Description

Protein NAR1 [Source:Projected from Arabidopsis thaliana (AT4G16440) UniProtKB/Swiss-Prot;Acc:Q94CL6]

Coordinates

chr8:+:54438487..54444196

Molecular Weight (calculated)

52257.8 Da

IEP (calculated)

6.894

GRAVY (calculated)

-0.165

Length

472 amino acids

Sequence
(BLAST)

001: MSQKFSATLR IGDLNDYIAP SQGCVVSLKT NSNRINKSEN VGKAGALSKP VQTEPVKISL KDCLACSGCI TSAETVMLEK QSLDEFLSNL EKGRTVIVSL
101: SPQSRAALAV HYGLSSLQVF RKLTTLFKSL GVNAIFDTSC SRDLTLIESC NEFMERYKQS QCTSSGESKP PLPMLSSACP GWICYAEKTL GSYILPYISS
201: VKSPQQTIGA VVKNFLCSKL SVRPEDIYHV TVMPCYDKKL EAAREDFVFQ VDTDSEKIME VDSVLTTGEV LDLIQLKAVD FQSLEESPLD KLFTNIDEKG
301: HLYGVHGSSG GYAETIYRHV AKVLLGQEVK GPLAFKTIRN SDFQEVSLEV NDKSVLKFAL CYGFRNLQNV VRKLKMGKSD YHFLEIMACP SGCLNGAGQI
401: KPQPGQSGKE LIQLLETAYV ENVVVADPFN NPIVMGLYSE WLEQPGSEKA RRYLHTEYHP VVKSITSQLQ NW

Best Arabidopsis Sequence Match ( AT4G16440.1 )
(BLAST)

001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW

Arabidopsis Description

NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.